Gene SNSL254_A0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0704 
Symbol 
ID6485068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp712917 
End bp713507 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content55% 
IMG OID642736117 
ProductLPS-assembly lipoprotein RlpB 
Protein accessionYP_002039890 
Protein GI194442518 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.712434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATATC TGGTAACACT GTTGTTATCT CTGGCGGTGC TGGTCACCGC CGGATGCGGC 
TGGCATCTGC GTAGCACTAC GCAGGTTCCG GCTTCAATGA AAACGATGAT CCTCGATTCC
GGCGATCCGA ACGGTCCGCT AAGTCGTGCG GTACGTAATC AGTTACGGCT GAATAACGTA
AACCTGCTTG ATAAAGACAC AACGCGCAAA GACGTTCCGT CTCTGCGGCT TGGAACGGTG
ACTATTTCGC AGGATACGGC GTCAGTGTTC CAGGACGGCC AGACGGCGGA ATATCAGATG
GTAATGACCG TCAATGCCTC GGTATTGATT CCGGGCCATG ACATCTATCC TATCAGCACG
AAAGTGTACC GTTCGTTCTT CGATAACCCG CAGATGGCGT TGGCGAAGGA TAACGAGCAG
GCCATGATCG TTCAGGAGAT GTATGACAAA GCCGCTGAAC AGCTGATTCG TAAGCTGACC
AGCGTCCGCG CGGCGGATAT TCAGGCGACG AAAGAGGAGG CTACCGCCGA CAATGAGACG
GCGGCGCCCG CCTCTACGCC AGCACGCGTC TCCACTACGC TGAGTAACTA A
 
Protein sequence
MRYLVTLLLS LAVLVTAGCG WHLRSTTQVP ASMKTMILDS GDPNGPLSRA VRNQLRLNNV 
NLLDKDTTRK DVPSLRLGTV TISQDTASVF QDGQTAEYQM VMTVNASVLI PGHDIYPIST
KVYRSFFDNP QMALAKDNEQ AMIVQEMYDK AAEQLIRKLT SVRAADIQAT KEEATADNET
AAPASTPARV STTLSN