Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0704 |
Symbol | |
ID | 6485068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 712917 |
End bp | 713507 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736117 |
Product | LPS-assembly lipoprotein RlpB |
Protein accession | YP_002039890 |
Protein GI | 194442518 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.712434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATATC TGGTAACACT GTTGTTATCT CTGGCGGTGC TGGTCACCGC CGGATGCGGC TGGCATCTGC GTAGCACTAC GCAGGTTCCG GCTTCAATGA AAACGATGAT CCTCGATTCC GGCGATCCGA ACGGTCCGCT AAGTCGTGCG GTACGTAATC AGTTACGGCT GAATAACGTA AACCTGCTTG ATAAAGACAC AACGCGCAAA GACGTTCCGT CTCTGCGGCT TGGAACGGTG ACTATTTCGC AGGATACGGC GTCAGTGTTC CAGGACGGCC AGACGGCGGA ATATCAGATG GTAATGACCG TCAATGCCTC GGTATTGATT CCGGGCCATG ACATCTATCC TATCAGCACG AAAGTGTACC GTTCGTTCTT CGATAACCCG CAGATGGCGT TGGCGAAGGA TAACGAGCAG GCCATGATCG TTCAGGAGAT GTATGACAAA GCCGCTGAAC AGCTGATTCG TAAGCTGACC AGCGTCCGCG CGGCGGATAT TCAGGCGACG AAAGAGGAGG CTACCGCCGA CAATGAGACG GCGGCGCCCG CCTCTACGCC AGCACGCGTC TCCACTACGC TGAGTAACTA A
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Protein sequence | MRYLVTLLLS LAVLVTAGCG WHLRSTTQVP ASMKTMILDS GDPNGPLSRA VRNQLRLNNV NLLDKDTTRK DVPSLRLGTV TISQDTASVF QDGQTAEYQM VMTVNASVLI PGHDIYPIST KVYRSFFDNP QMALAKDNEQ AMIVQEMYDK AAEQLIRKLT SVRAADIQAT KEEATADNET AAPASTPARV STTLSN
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