Gene SNSL254_A0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0620 
Symbol 
ID6486190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp628606 
End bp630000 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content53% 
IMG OID642736035 
Productphenylalanine transporter 
Protein accessionYP_002039808 
Protein GI194444869 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.455988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAACG CGTCAACTGC ATCCGGCGCC AGCGTGTCGG ATGCCGCGTC GAAGAATGAA 
CCGACGCTTC AACGGGGGTT GCAAAACCGC CATATTCAGC TAATCGCCCT GGGCGGCGCC
ATTGGCACCG GACTGTTTCT GGGCATCGGC CCGGCGATTC AAATGGCGGG GCCGGCTGTT
TTGTTGGGCT ATGGCGTTGC CGGGATTATC GCTTTTCTCA TTATGCGCCA GTTGGGTGAA
ATGGTCGTGG AAGAGCCGGT TTCCGGATCG TTTGCCCACT TCGCCTGGAA ATATTGGGGG
CCGTTTGCGG GCTTTTTGTC GGGTTGGAAC TATTGGGTCA TGTTTGTGCT GGTCGGGATG
GCGGAGCTGA CCGCGGCGGG CATCTATATG CAGTACTGGC TGCCTGACGT ACCAACATGG
GTATGGGCGG CGGCGTTTTT TATTATCATT AATGCCGTGA ATCTGGTGAA CGTTCGTCTG
TATGGCGAAA CGGAATTCTG GTTCGCGCTG ATTAAAGTGC TGGCGATTAT CGGCATGATA
GGTTTTGGTC TGTGGCTGCT GTTCTCCGGC CACGGCGGCG AACATGCCAG CATTGATAAC
CTCTGGCGTT ATAACGGTTT CTTCGCTACC GGTTGGCATG GTTTGCTTCT GTCGCTGGCG
GTGATTATGT TTTCTTTTGG CGGACTGGAG CTGATCGGCA TTACTGCGGC GGAAGCGCGC
GATCCACAAA AAAGCATTCC GAAAGCGGTG AATCAGGTGG TATACCGTAT TTTGCTGTTC
TACATCGGTT CGCTGGTGGT GTTGCTGGCG CTCTATCCGT GGGTAGAGGT GAAATCCAAT
AGCAGCCCTT TTGTGATGAT CTTCCATAAC CTGGACAGTA ATGTGGTGGC TTCGGCGCTG
AATTTCGTTA TCCTGGTCGC GTCGCTTTCG GTGTATAACA GCGGCGTTTA TTCGAATAGC
CGAATGCTGT TCGGCCTGTC CGTACAAGGC AACGCGCCGA AATTTTTAAC CCGCGTCAGC
CATCGCGGCG TGCCGGTGAA CTCGCTGATG CTTTCCGGAG CGATTACCTC GCTGGTGGTG
CTGATCAACT ATCTGTTGCC GCAAAAAGCG TTTAGCCTGT TGATGGCGCT GGTTGTCGCG
ACGCTATTGC TAAACTGGAT AATGATCTGT CTCGCGCATT TACGTTTTCG CGCGGCGATG
CGTCGTAAAG GGCGCGAGAC GCAATTTAAG GCGCTGTTCT ATCCCGCCGG AAACTATTTG
TGCATTGCGT TTCTGGCGCT GATTCTGGTG TTAATGTGTA CGATGGACGA TATGCGATTG
TCGGCGATTT TGCTGCCGGT ATGGATTGTA TTCCTGTTTA TCGCGTTTAC CGTTTTGCGC
CGTAAGGCTC ATTAA
 
Protein sequence
MKNASTASGA SVSDAASKNE PTLQRGLQNR HIQLIALGGA IGTGLFLGIG PAIQMAGPAV 
LLGYGVAGII AFLIMRQLGE MVVEEPVSGS FAHFAWKYWG PFAGFLSGWN YWVMFVLVGM
AELTAAGIYM QYWLPDVPTW VWAAAFFIII NAVNLVNVRL YGETEFWFAL IKVLAIIGMI
GFGLWLLFSG HGGEHASIDN LWRYNGFFAT GWHGLLLSLA VIMFSFGGLE LIGITAAEAR
DPQKSIPKAV NQVVYRILLF YIGSLVVLLA LYPWVEVKSN SSPFVMIFHN LDSNVVASAL
NFVILVASLS VYNSGVYSNS RMLFGLSVQG NAPKFLTRVS HRGVPVNSLM LSGAITSLVV
LINYLLPQKA FSLLMALVVA TLLLNWIMIC LAHLRFRAAM RRKGRETQFK ALFYPAGNYL
CIAFLALILV LMCTMDDMRL SAILLPVWIV FLFIAFTVLR RKAH