Gene SNSL254_A0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0577 
Symbol 
ID6486738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp589774 
End bp591072 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content51% 
IMG OID642735994 
Productputative purine permease YbbY 
Protein accessionYP_002039768 
Protein GI194443872 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCTG TTATTAACCG CGAAAGTGTA TTGTCCGGCT TTCAGTGGTT TTTCTTTATT 
TTCTGTAACA CGGTTGTGGT TCCCCCTACC TTGCTGTCCG CTTTTCATCT TCCCGCTGAT
AACCTGTTAA TGCTCACACA ATACGCTTTT TTGACCACCG CGTTGGCCTG CCTGGTTCAG
GCATTTTGCG GCCATCGCCG CGCCATTATG GAAGGGCCGA CAGGGCTGTG GTGGGGCGCT
ATTCTTACGA TTACGCTTGG CGAGGCGTCT CGCGGCACGC CGTTGAACGA TATCGCCTCC
AGCCTGTCGG TCGGGATCGC GATCTCCGCG ATGGTGACGA TATTTATCGG CATTAGCGGC
TTAGGACACC GTCTGGCTCG CCTGTTTACG CCGGCGGTGA TGGTTTTTTT CATGCTGCTT
TTGGGCGCGC AGCTGACCTC AATATTTTTT AAAGGCATGC TGGGGCTGCC TTTTGGCATT
GCCGATACCA GCGCCAGAAT CAAATTGGCC CCCTTTGGGT TGGCGGTCGC GGTGATGTGT
TTTATCCTCG CGATGATTAT TTTCCTACAA CAGCGTATCT CCCGTTACGC GTTACTGGTA
GGGACCGTGG TCGGGTGGGG GCTATGGCGG TTATGCTTTC CTTCATCACA CTTACCGCCG
GGTGAATTAA GCTGGCGATG GTTTCCGCTG GGCAGCCACG GCACGCTGAT GCCGGGTATT
ATTGTGACGG CGGTGATGAC GGGGTTAGTC AACATCAGCA ACACTTACGG CGCCATCCGC
GGTACCGATA TCTTTTATCC GCATCAAGGG TCGGGCAGTT CTCGTTATCG CCGAAGCTTT
ATGATTTCCG GACTGATGAC GTTAGTGACG GTGCCTTTCG CGGTCGTGCC TTTTTCGCCT
TTTGTGTCTT CCATTGGTTT ATTAACGCAA ACCGGCGACA GTTCTCGCAA ATCTTTTATC
TGCGGTAGCG CGCTGTGTCT GCTGGTTGCC ATTATAACGC CGTTAACCCG CTTATTTTGC
GCTATTCCAC TGGCGATCAG CAGCGCCGTT ATGCTGGTCT CTTATTTACC TTTACTTTAT
TCCGGTTTGG TTTTTAGCCA GCAAATTACG TTTACCGCGC GGAATATTTA TCGCCTGGCA
TTACCGCTTT TTGTCGGCAT TTTTTTGATG GGGCTTCCTC CGGTCTATTT ACAGGATCTT
CCACTGATGA TTCGTCCTTT GCTTAGTAAC GGATTACTGG TGGGAATCTT ACTGGCAGTG
CTTATGGAAA ATCTTATTCC GTGGGAACGC ATTAAATAA
 
Protein sequence
MFPVINRESV LSGFQWFFFI FCNTVVVPPT LLSAFHLPAD NLLMLTQYAF LTTALACLVQ 
AFCGHRRAIM EGPTGLWWGA ILTITLGEAS RGTPLNDIAS SLSVGIAISA MVTIFIGISG
LGHRLARLFT PAVMVFFMLL LGAQLTSIFF KGMLGLPFGI ADTSARIKLA PFGLAVAVMC
FILAMIIFLQ QRISRYALLV GTVVGWGLWR LCFPSSHLPP GELSWRWFPL GSHGTLMPGI
IVTAVMTGLV NISNTYGAIR GTDIFYPHQG SGSSRYRRSF MISGLMTLVT VPFAVVPFSP
FVSSIGLLTQ TGDSSRKSFI CGSALCLLVA IITPLTRLFC AIPLAISSAV MLVSYLPLLY
SGLVFSQQIT FTARNIYRLA LPLFVGIFLM GLPPVYLQDL PLMIRPLLSN GLLVGILLAV
LMENLIPWER IK