Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0525 |
Symbol | |
ID | 6483856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 533644 |
End bp | 536793 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735944 |
Product | acriflavine resistance protein B |
Protein accession | YP_002039718 |
Protein GI | 194446686 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.452979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAATT TCTTTATCGA TCGCCCTATA TTTGCGTGGG TGATCGCCAT CATCATCATG TTGGCAGGGG GGCTCGCGAT CCTCAAATTG CCGGTAGCGC AATATCCGAC GATTGCGCCA CCAGCAGTGA CGATCTCCGC AACCTACCCT GGCGCTGATG CGAAAACGGT ACAGGATACC GTCACGCAGG TTATCGAACA GAATATGAAC GGTATCGATA ACCTGATGTA TATGTCCTCC AACAGTGACT CCACGGGGAC CGTGCAGATC ACGCTGACCT TTGAATCCGG CACCGATGCG GACATCGCGC AGGTTCAGGT TCAGAACAAG TTGCAACTGG CAATGCCGTT ACTTCCCCAG GAAGTACAGC AACAGGGCGT GAGCGTTGAG AAGTCCTCAA GTAGCTTCCT GATGGTAGTG GGCGTCATTA ACACCGACGG CACCATGACC CAGGAGGATA TTTCGGATTA CGTTGCCGCC AATATGAAAG ATCCGATCAG CCGTACCTCT GGGGTGGGCG ACGTTCAGCT GTTTGGTTCG CAGTATGCGA TGCGTATCTG GATGAATCCG ACAGAGCTGA CCAAATACCA ACTGACGCCG GTCGACGTGA TTAACGCGAT CAAAGCGCAG AACGCCCAGG TCGCGGCAGG TCAGCTCGGT GGTACGCCGC CGGTAAAAGG CCAGCAGCTT AACGCATCGA TTATTGCCCA AACGCGTCTG ACCTCAACGG ATGAGTTTGG CAAAATCCTG CTGAAAGTGA ATCAGGATGG CTCCCAGGTT CGTCTGCGGG ATGTAGCGAA AATTGAGCTT GGCGGCGAAA ACTACGACGT CATCGCGAAA TTTAACGGTC AGCCAGCGTC AGGTCTTGGC ATCAAACTGG CTACCGGCGC CAACGCGCTG GATACCGCTA CCGCTATTCG CGCCGAACTG AAAAAAATGG AACCGTTCTT CCCGCCAGGG ATGAAAATCG TCTACCCGTA TGACACCACG CCGTTCGTGA AGATCTCTAT TCATGAAGTG GTAAAAACGC TGGTCGAAGC GATTATCCTC GTGTTCCTGG TGATGTACCT GTTCCTGCAG AACTTCCGCG CGACGTTGAT TCCGACTATT GCGGTTCCGG TGGTGTTGTT GGGAACCTTT GCCGTGCTTG CGGCATTCGG TTTCTCGATA AACACGCTGA CGATGTTCGG GATGGTGCTC GCCATCGGCT TGCTGGTGGA TGACGCCATC GTGGTGGTCG AGAACGTCGA ACGTGTTATG ACGGAAGAAG GCCTTCCGCC GAAGGAAGCG ACGCGCAAAT CCATGGGCCA GATTCAGGGC GCATTGGTGG GTATCGCGAT GGTACTGTCG GCGGTATTTA TTCCGATGGC CTTCTTTGGC GGCTCAACCG GGGCAATTTA TCGTCAGTTC TCTATCACCA TCGTATCGGC GATGGCGCTG TCGGTGCTGG TCGCGCTGAT CCTGACGCCT GCGCTGTGCG CGACGATGCT CAAACCCGTC GCCAAAGGCG ATCATGGCGA AGGGAAAAAA GGCTTTTTCG GCTGGTTTAA CCGCCTGTTC GATAAGAGCA CGCATCACTA CACCGATAGC GTAGGCAATA TTCTGCGCAG CACCGGGCGT TATCTGCTGC TCTATCTCAT TATCGTCGTC GGTATGGCTT ATCTGTTCGT TCGTCTGCCA AGCTCTTTCT TGCCGGATGA AGACCAGGGC GTATTCCTGA CAATGGTCCA GCTCCCCGCC GGCGCGACGC AAGAGCGCAC GCAAAAAGTG CTGGATGAGG TCACGGATTA CTATCTGAAC AAAGAGAAAG CCAACGTTGA ATCGGTATTC GCCGTCAACG GCTTCGGTTT TGCAGGGCGC GGTCAGAATA CCGGTATTGC ATTCGTGTCG TTGAAAGACT GGGCCGATCG TCCAGGCGAA AAAAACAAGG TTGAAGCGAT TACCCAGCGG GCAACCGCAG CGTTTTCACA AATTAAAGAT GCGATGGTCT TCGCCTTTAA CCTGCCGGCG ATTGTTGAAC TGGGCACCGC AACCGGGTTT GACTTCGAGT TGATTGACCA GGCGGGACTT GGTCATGAAA AACTCACCCA GGCACGTAAT CAGTTGTTCG GCGAGGTGGC GAAATATCCT GATCTGCTGG TCGGCGTTCG ACCTAACGGC CTGGAAGATA CGCCGCAGTT TAAAATCGAT ATCGACCAGG AAAAAGCTCA GGCGCTGGGC GTGTCTATTA GCGACATTAA TACCACGCTG GGCGCAGCAT GGGGCGGCAG CTATGTAAAC GACTTTATCG ATCGCGGTCG TGTGAAGAAA GTTTACGTGA TGTCCGAAGC GAAATACCGC ATGTTGCCGG ATGATATTAA CGACTGGTAC GTTCGTGGTA GCGATGGTCA GATGGTGCCG TTCTCCGCAT TCTCCTCTTC CCGCTGGGAA TATGGTTCGC CACGTCTGGA ACGCTATAAC GGTCTGCCTT CGATGGAAAT TCTGGGTCAG GCGGCGCCAG GCAAGAGTAC TGGTGAAGCG ATGGCGATGA TGGAAGAACT GGCCAGCAAG CTGCCGTCAG GCATTGGGTA TGACTGGACC GGGATGTCCT ACCAGGAGCG GTTGTCCGGC AACCAGGCCC CTGCCCTGTA TGCTATCTCG CTGATCGTCG TCTTCCTGTG TCTGGCGGCA TTGTATGAGA GCTGGTCTAT CCCGTTCTCC GTAATGCTGG TTGTTCCGCT TGGGGTTATC GGCGCGCTGC TGGCTGCCAC CTTCCGCGGA CTGACTAACG ACGTTTACTT CCAGGTGGGC CTGCTCACAA CCATTGGGTT GTCGGCGAAG AACGCGATAC TTATCGTCGA ATTCGCCAAA GACTTAATGG ATAAAGAAGG GAAAGGTCTG GTAGAAGCGA CGCTGGAGGC CGTCCGGATG CGTTTGCGCC CGATTCTGAT GACCTCGTTA GCGTTCATGC TGGGGGTTAT GCCGCTGGTT ATCAGTTCCG GCGCGGGTTC CGGCGCGCAG AATGCGGTAG GTACTGGCGT ACTGGGCGGG ATGGTAACGG CAACCGTACT GGCTATTTTC TTCGTACCGG TCTTCTTCGT GGTGGTACGC CGCCGCTTTA GCCGTAAAAG CGAAGATATT GAGCATAGTC ATTCGACAGA ACATCGCTGA
|
Protein sequence | MPNFFIDRPI FAWVIAIIIM LAGGLAILKL PVAQYPTIAP PAVTISATYP GADAKTVQDT VTQVIEQNMN GIDNLMYMSS NSDSTGTVQI TLTFESGTDA DIAQVQVQNK LQLAMPLLPQ EVQQQGVSVE KSSSSFLMVV GVINTDGTMT QEDISDYVAA NMKDPISRTS GVGDVQLFGS QYAMRIWMNP TELTKYQLTP VDVINAIKAQ NAQVAAGQLG GTPPVKGQQL NASIIAQTRL TSTDEFGKIL LKVNQDGSQV RLRDVAKIEL GGENYDVIAK FNGQPASGLG IKLATGANAL DTATAIRAEL KKMEPFFPPG MKIVYPYDTT PFVKISIHEV VKTLVEAIIL VFLVMYLFLQ NFRATLIPTI AVPVVLLGTF AVLAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM TEEGLPPKEA TRKSMGQIQG ALVGIAMVLS AVFIPMAFFG GSTGAIYRQF SITIVSAMAL SVLVALILTP ALCATMLKPV AKGDHGEGKK GFFGWFNRLF DKSTHHYTDS VGNILRSTGR YLLLYLIIVV GMAYLFVRLP SSFLPDEDQG VFLTMVQLPA GATQERTQKV LDEVTDYYLN KEKANVESVF AVNGFGFAGR GQNTGIAFVS LKDWADRPGE KNKVEAITQR ATAAFSQIKD AMVFAFNLPA IVELGTATGF DFELIDQAGL GHEKLTQARN QLFGEVAKYP DLLVGVRPNG LEDTPQFKID IDQEKAQALG VSISDINTTL GAAWGGSYVN DFIDRGRVKK VYVMSEAKYR MLPDDINDWY VRGSDGQMVP FSAFSSSRWE YGSPRLERYN GLPSMEILGQ AAPGKSTGEA MAMMEELASK LPSGIGYDWT GMSYQERLSG NQAPALYAIS LIVVFLCLAA LYESWSIPFS VMLVVPLGVI GALLAATFRG LTNDVYFQVG LLTTIGLSAK NAILIVEFAK DLMDKEGKGL VEATLEAVRM RLRPILMTSL AFMLGVMPLV ISSGAGSGAQ NAVGTGVLGG MVTATVLAIF FVPVFFVVVR RRFSRKSEDI EHSHSTEHR
|
| |