Gene SNSL254_A0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0515 
Symbol 
ID6483274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp527752 
End bp528321 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content54% 
IMG OID642735935 
Productputative lipoprotein 
Protein accessionYP_002039709 
Protein GI194442280 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.335784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG TGCACATCGT AAGTGGTTTA GCGGTTGCGA TATCTCTGGC GGCCTGCGCT 
GATAAAAGCG CTGATATCCA GACGCCTGCG CCAAACCCTA ACATGTCGAT TACAGCTAAC
CAGTCTACTA TTCAGCAACC CAATGTTTCC GGTACCGTCT GGATCCGCCA GAAGGTCGCT
CTGCCGCCAG ATGCGGTGCT GACCGTGACG CTTTCAGATG CTTCGCTGGC TGATGCGCCG
TCTAAGGTGC TGTCGCAAAA AGCGGTACGT ACCGAAGGTA AACAGGCGCC TTTCAGTTTT
GTGTTGCCGT TTAACCCATC AGATATTCAA CCTAACGCGC GTATTCTCCT GAGCGCGGCC
ATCACCGTTG ACAATAAGCT GGTATTTATT ACCGATAGCG TGAAACCGGT GATTAACAAT
GGCGGCACTA AAGCGGATCT GACGCTGGTA CCGGTACAGC AAACGGCGGT GCCTGTGCAG
GCCAGCGGTG GTGCGACGAC GACGGTTCCA TCGACTTCGC CGACCCAGGT CAATCCGTCT
TCTGCCGTTC CTGCGCCTAC CCAGTATTAA
 
Protein sequence
MKLVHIVSGL AVAISLAACA DKSADIQTPA PNPNMSITAN QSTIQQPNVS GTVWIRQKVA 
LPPDAVLTVT LSDASLADAP SKVLSQKAVR TEGKQAPFSF VLPFNPSDIQ PNARILLSAA
ITVDNKLVFI TDSVKPVINN GGTKADLTLV PVQQTAVPVQ ASGGATTTVP STSPTQVNPS
SAVPAPTQY