Gene SNSL254_A0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0509 
Symbol 
ID6482921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp521162 
End bp522934 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content56% 
IMG OID642735929 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_002039703 
Protein GI194442312 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.726436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATTAT TTGCTCAATT AAGCTGGTAC TTTCGCCGGG AATGGCGTCG CTATCTTGGC 
GCGGTGGCCC TGCTTATGCT TATTGCGATG CTTCAGCTGA TCCCGCCCAA AGTGGTGGGG
ATTGTCGTGG ATGGCGTAAC CGCACAGCAT TTTACTCCAG GCCGAATAGC GATGTGGATT
GGCACCATTG CCCTGATCGC CGTAGTGGTC TATTTGTTGC GCTATGTCTG GCGCGTGCTG
CTATTTGGCG CTTCTTATCA ATTAGCCGTC GAACTGCGTG AAGATTATTA TCGCCAGCTG
AGTCGTCAGC ATCCTGAATT TTATCAGCGC CATCGGACGG GCGATCTTAT CGCGCGCGCG
ACGAATGATG TGGATCGCGT CGTATTTGCG GCGGGCGAGG GCGTTCTGAC GCTGGTTGAC
TCGCTGGTAA TGGGCTGCGC GGTACTGATT GTCATGTCGA CGCAAATTAG CTGGCAGCTA
ACGCTATTAG CGCTGTTGCC AATGCCGATT ATGGCGCTGA TGATCAAACG TTACGGCGAT
CGGCTGCATG ATTATTTCAA ACTGGCGCAG GCCGCCTTCT CCAGCCTGAA CGATCGCACG
CAGGAGAGTC TGACCAGCAT CCGCATGATC AAAGCGTTTG GTCTGGAGGA TCGCCAGTCT
TCGCTGTTTG CGGCGGATGC CGAAGATACC GGCAAGAAAA ATATGCGCGT GGCGCGTATT
GACGCGCGTT TTGATCCAAC CATTTACATC GCCATTGGCA TGGCGAACCT GCTTGCGATT
AGCGGCGGAA GCTGGATGGT GGTTAACGGC AGCCTGACGC TGGGCGAACT CACCAGCTTT
ATGATGTATC TGGGGTTGAT GATTTGGCCG ATGCTGGCGC TGGCCTGGAT GTTTAATATC
GTGGAGCGGG GGAGCGCCGC TTACAGCCGC ATCCGCGCCA TGCTGGCGGA AGCGCCGGTA
GTTAAGGATG GCGAAGAGCC GGTCCCGGCT GGGCGCGGCG AACTGACGGC GGCCATTCGT
GAGTTTTGCT ATCCGCAAAC GACGCATCCG GCGCTGGAGA ATGTGAACTT TCGTCTTAAA
CCGGGTCAGA TGCTGGGGAT ATGCGGTCCG ACCGGCGCGG GGAAAAGCAC AATATTGTCG
CTTATCCAGC GCCATTTTGA TGTGACGCAG GGAGAGATCC GATTCCATGA CATGCCGTTG
ACGCATCTGC AACTGGATAG CTGGCGTAGC CGACTGGCGG TTGTCAGCCA GACGCCGTTT
TTGTTCTCGG ACTCTATTGC CAATAATATT GCGCTCGGAC GCCCGGAGGC GACTCAGGAG
GAGATTGAAC AGGTGGCGCG TTTAGCCAGC GTACATGAGG ATATTCTCCG TTTGCCTCAG
GGCTACGACA CGCAGGTAGG CGAACGTGGC GTCATGTTAT CGGGTGGGCA AAAACAGCGT
ATCTCGATTG CCAGAGCGCT GCTGTTGAAT GCGGAAATTC TGCTTCTCGA TGATGCGCTT
TCTGCAGTAG ATGGCCGCAC GGAGCATCAG ATTTTGCATA ATTTGCGCCA GTGGGGCGAA
GGGCGTACGG TCATCATCAG CGCGCATCGT TTATCCGCGC TGACCGACGC CAATGAAATT
ATCGTTATGC AACATGGTCA TGTTGTTCAG CGCGGCGATC ACGATCAACT GGCGCAGCAG
ATTGGCTGGT ATCGCGATAT GTATCGCTAT CAGCAACTGG AGGCCGCTCT GGATGACGCG
CCGGAACGCG GCGAGGAGGC GGTGAATGCG TAG
 
Protein sequence
MRLFAQLSWY FRREWRRYLG AVALLMLIAM LQLIPPKVVG IVVDGVTAQH FTPGRIAMWI 
GTIALIAVVV YLLRYVWRVL LFGASYQLAV ELREDYYRQL SRQHPEFYQR HRTGDLIARA
TNDVDRVVFA AGEGVLTLVD SLVMGCAVLI VMSTQISWQL TLLALLPMPI MALMIKRYGD
RLHDYFKLAQ AAFSSLNDRT QESLTSIRMI KAFGLEDRQS SLFAADAEDT GKKNMRVARI
DARFDPTIYI AIGMANLLAI SGGSWMVVNG SLTLGELTSF MMYLGLMIWP MLALAWMFNI
VERGSAAYSR IRAMLAEAPV VKDGEEPVPA GRGELTAAIR EFCYPQTTHP ALENVNFRLK
PGQMLGICGP TGAGKSTILS LIQRHFDVTQ GEIRFHDMPL THLQLDSWRS RLAVVSQTPF
LFSDSIANNI ALGRPEATQE EIEQVARLAS VHEDILRLPQ GYDTQVGERG VMLSGGQKQR
ISIARALLLN AEILLLDDAL SAVDGRTEHQ ILHNLRQWGE GRTVIISAHR LSALTDANEI
IVMQHGHVVQ RGDHDQLAQQ IGWYRDMYRY QQLEAALDDA PERGEEAVNA