Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0509 |
Symbol | |
ID | 6482921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 521162 |
End bp | 522934 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642735929 |
Product | putative multidrug transporter membraneATP-binding components |
Protein accession | YP_002039703 |
Protein GI | 194442312 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.726436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATTAT TTGCTCAATT AAGCTGGTAC TTTCGCCGGG AATGGCGTCG CTATCTTGGC GCGGTGGCCC TGCTTATGCT TATTGCGATG CTTCAGCTGA TCCCGCCCAA AGTGGTGGGG ATTGTCGTGG ATGGCGTAAC CGCACAGCAT TTTACTCCAG GCCGAATAGC GATGTGGATT GGCACCATTG CCCTGATCGC CGTAGTGGTC TATTTGTTGC GCTATGTCTG GCGCGTGCTG CTATTTGGCG CTTCTTATCA ATTAGCCGTC GAACTGCGTG AAGATTATTA TCGCCAGCTG AGTCGTCAGC ATCCTGAATT TTATCAGCGC CATCGGACGG GCGATCTTAT CGCGCGCGCG ACGAATGATG TGGATCGCGT CGTATTTGCG GCGGGCGAGG GCGTTCTGAC GCTGGTTGAC TCGCTGGTAA TGGGCTGCGC GGTACTGATT GTCATGTCGA CGCAAATTAG CTGGCAGCTA ACGCTATTAG CGCTGTTGCC AATGCCGATT ATGGCGCTGA TGATCAAACG TTACGGCGAT CGGCTGCATG ATTATTTCAA ACTGGCGCAG GCCGCCTTCT CCAGCCTGAA CGATCGCACG CAGGAGAGTC TGACCAGCAT CCGCATGATC AAAGCGTTTG GTCTGGAGGA TCGCCAGTCT TCGCTGTTTG CGGCGGATGC CGAAGATACC GGCAAGAAAA ATATGCGCGT GGCGCGTATT GACGCGCGTT TTGATCCAAC CATTTACATC GCCATTGGCA TGGCGAACCT GCTTGCGATT AGCGGCGGAA GCTGGATGGT GGTTAACGGC AGCCTGACGC TGGGCGAACT CACCAGCTTT ATGATGTATC TGGGGTTGAT GATTTGGCCG ATGCTGGCGC TGGCCTGGAT GTTTAATATC GTGGAGCGGG GGAGCGCCGC TTACAGCCGC ATCCGCGCCA TGCTGGCGGA AGCGCCGGTA GTTAAGGATG GCGAAGAGCC GGTCCCGGCT GGGCGCGGCG AACTGACGGC GGCCATTCGT GAGTTTTGCT ATCCGCAAAC GACGCATCCG GCGCTGGAGA ATGTGAACTT TCGTCTTAAA CCGGGTCAGA TGCTGGGGAT ATGCGGTCCG ACCGGCGCGG GGAAAAGCAC AATATTGTCG CTTATCCAGC GCCATTTTGA TGTGACGCAG GGAGAGATCC GATTCCATGA CATGCCGTTG ACGCATCTGC AACTGGATAG CTGGCGTAGC CGACTGGCGG TTGTCAGCCA GACGCCGTTT TTGTTCTCGG ACTCTATTGC CAATAATATT GCGCTCGGAC GCCCGGAGGC GACTCAGGAG GAGATTGAAC AGGTGGCGCG TTTAGCCAGC GTACATGAGG ATATTCTCCG TTTGCCTCAG GGCTACGACA CGCAGGTAGG CGAACGTGGC GTCATGTTAT CGGGTGGGCA AAAACAGCGT ATCTCGATTG CCAGAGCGCT GCTGTTGAAT GCGGAAATTC TGCTTCTCGA TGATGCGCTT TCTGCAGTAG ATGGCCGCAC GGAGCATCAG ATTTTGCATA ATTTGCGCCA GTGGGGCGAA GGGCGTACGG TCATCATCAG CGCGCATCGT TTATCCGCGC TGACCGACGC CAATGAAATT ATCGTTATGC AACATGGTCA TGTTGTTCAG CGCGGCGATC ACGATCAACT GGCGCAGCAG ATTGGCTGGT ATCGCGATAT GTATCGCTAT CAGCAACTGG AGGCCGCTCT GGATGACGCG CCGGAACGCG GCGAGGAGGC GGTGAATGCG TAG
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Protein sequence | MRLFAQLSWY FRREWRRYLG AVALLMLIAM LQLIPPKVVG IVVDGVTAQH FTPGRIAMWI GTIALIAVVV YLLRYVWRVL LFGASYQLAV ELREDYYRQL SRQHPEFYQR HRTGDLIARA TNDVDRVVFA AGEGVLTLVD SLVMGCAVLI VMSTQISWQL TLLALLPMPI MALMIKRYGD RLHDYFKLAQ AAFSSLNDRT QESLTSIRMI KAFGLEDRQS SLFAADAEDT GKKNMRVARI DARFDPTIYI AIGMANLLAI SGGSWMVVNG SLTLGELTSF MMYLGLMIWP MLALAWMFNI VERGSAAYSR IRAMLAEAPV VKDGEEPVPA GRGELTAAIR EFCYPQTTHP ALENVNFRLK PGQMLGICGP TGAGKSTILS LIQRHFDVTQ GEIRFHDMPL THLQLDSWRS RLAVVSQTPF LFSDSIANNI ALGRPEATQE EIEQVARLAS VHEDILRLPQ GYDTQVGERG VMLSGGQKQR ISIARALLLN AEILLLDDAL SAVDGRTEHQ ILHNLRQWGE GRTVIISAHR LSALTDANEI IVMQHGHVVQ RGDHDQLAQQ IGWYRDMYRY QQLEAALDDA PERGEEAVNA
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