Gene SNSL254_A0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0370 
SymbolleuC 
ID6486055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp377233 
End bp378654 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content51% 
IMG OID642735795 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_002039569 
Protein GI194442218 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTA AAACGCTGTA TGAAAAATTA GTTGAGTCAC ATACCATTCG TGAACTTGAT 
AACGAAGGAC ATGTTTTACT TTATATTGAT CGTTCAATAC TGAATGAATA TACCAGCCCG
CAGGCATTTA GCGGGTTAAG AGAACGCGGC CGCACCGTTC GGCACCCCGA CACGTTTTTA
TTGAATATTG ACCATGTTAA TCCTACGCGG TCGCAACGGG ATGACTTAAT GACCGATCCG
GGAGGACAGC TACAGGTTGA TTACTTTCGG GAAAATGCCG CTGACTTTGA CATCACATTA
TTTGATGTGC TGGATCCGCG TCAGGGGATT GAACACGTGG TTGCTCATGA ACAAGGGCTA
GTGATGCCTG GCATGGTGAT CGCCGCCGGG GATAGTCACA CGACAACCTA CGGTGCATTT
GGCGCGCTGG GCTTTGGTAT CGGGACGTCG GAAATTGAAC ATCTGCTGGC CACGCAGACG
TTGGTTTACC GCAAGCTCAA AACCATGCGC GTAAGTGTTC AGGGAGAGCT ACCTTTCGCC
TGTTCCGCAA AAGATATTGT TCTTGAATTG CTTGAACGTA TTGGCGCTGA TGGCGCGACG
GGATATGCCA TTGAATTTGT GGGTGAGGCC ATCAGCGCGT TGAGCGTTGA AGGACGAATG
ACGCTCTGCA ACATGGCGGT AGAAGCGGGG GCGCGTGGTG CTATTATTGC GCCGGATAAA
AAGGTTTTTG ACTATATCTA CGGTAAACCG CAAATGCCTG TAGGTGAACT CTGGCAGCAG
GCATTGCTGG AATGGTCACA GTTGAGCAGC GATGCTGATG CGGTATTTGA TAAGACGGTG
GCGATCAACT GCCATGATCT TGAGCCTAAA GTCACCTGGG GAATCAGTCC GGATCAAACA
GGTTCCATCA CCGGACGTGT CCCTTTCCCG GAACAGGAAA CCAATCCGCT TAAGCGCCTG
GCGCTTGAGA AGGCCCTTCA TTACATGGGA TTAACGGCTG GCATGTTGCT GAAAGATATT
CGTATCTCTC ACGCTTTTAT TGGTTCATGC ACAAATGGTC GCATTGAGGA TTTGCGTGCC
GTTGCGAAGG TGCTTGAAGG GCGCAAAATC GCCAGCCATG TTCGCGGGAT CATTGTGCCT
GGTTCAACAA TGGTAAGACG CCAGGCGGAA GAAGAAGGAC TGGCGAAAAT CTTTATTGCT
GCCGGTTTTG AATGGCGGCA GTCGGGTTGC TCAATGTGCC TTGCGATGAA TGAAGATGTG
TTGTCGCCCG GCGATCGCTG TGCATCAGGT ACGAACCGTA ATTTCCCTGG ACGACAGGGC
GCTGGAGCAA GAACGCATTT GATGAGCCCG GCGATGGTTG CGGCGGCGGC GGTAGCGGGG
CATCTGGTCG ATGTTCGGTC ATTACTTCAG GCAGGGGAAT AA
 
Protein sequence
MSAKTLYEKL VESHTIRELD NEGHVLLYID RSILNEYTSP QAFSGLRERG RTVRHPDTFL 
LNIDHVNPTR SQRDDLMTDP GGQLQVDYFR ENAADFDITL FDVLDPRQGI EHVVAHEQGL
VMPGMVIAAG DSHTTTYGAF GALGFGIGTS EIEHLLATQT LVYRKLKTMR VSVQGELPFA
CSAKDIVLEL LERIGADGAT GYAIEFVGEA ISALSVEGRM TLCNMAVEAG ARGAIIAPDK
KVFDYIYGKP QMPVGELWQQ ALLEWSQLSS DADAVFDKTV AINCHDLEPK VTWGISPDQT
GSITGRVPFP EQETNPLKRL ALEKALHYMG LTAGMLLKDI RISHAFIGSC TNGRIEDLRA
VAKVLEGRKI ASHVRGIIVP GSTMVRRQAE EEGLAKIFIA AGFEWRQSGC SMCLAMNEDV
LSPGDRCASG TNRNFPGRQG AGARTHLMSP AMVAAAAVAG HLVDVRSLLQ AGE