Gene SNSL254_A0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0354 
SymbolprfH 
ID6483406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp364663 
End bp365277 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content55% 
IMG OID642735782 
Productpeptide chain release factor-like protein 
Protein accessionYP_002039557 
Protein GI194443695 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR03072] putative peptide chain release factor H 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTAC TGCAACTTTC TTCCGCACAG GGACCGGACG AGTGTTGTCT GGCGGTAAAA 
AAAGCGCTGG ATTGTCTGAC GAAAGAAGCC GCCAGAGAAA AGGTATCGCT GACACGGCTT
GAAACAGAGC CGGGACGATT ACCAGACACG CTGCGTTCCG CGCTGGTCTC GCTGGACGGC
GAAAAAGCCA TGGCTTTCAG TGAACGTTGG TGCGGCACGT TACTGTGGAT TTGTACCAGC
CCGTATCGCC CGCACCATGG GCGAAAAAAC TGGTACGTCG GCATTGGGCG CTTTTCCGCC
GACGAACACA TACAGTCTGA TGAGATTCGT TTCGAGACTC TGCGCTCTTC CGGCCCGGGT
GGGCAGCACG TTAATAAAAC TGACTCGGCA GTGCGGGCCA CGCACCTGGC GAGCGGGATT
AGCGTGAAGG TTCAGTCGGA GCGCAGTCAA CATGCGAATA AGCGTCTGGC CCGGCTGCTG
ATTGCCTGGC GGCTGGAACA GCAACGGCAA AATGAGTGTG CGGCGTTGAA GTCTGAAAGG
CGTCTGTTCC ATCATCAGAT TGAGCGCGGC AATCCGCTAC GGATATTTAA AGGAATGGCG
TTTACGCCAC AATAA
 
Protein sequence
MILLQLSSAQ GPDECCLAVK KALDCLTKEA AREKVSLTRL ETEPGRLPDT LRSALVSLDG 
EKAMAFSERW CGTLLWICTS PYRPHHGRKN WYVGIGRFSA DEHIQSDEIR FETLRSSGPG
GQHVNKTDSA VRATHLASGI SVKVQSERSQ HANKRLARLL IAWRLEQQRQ NECAALKSER
RLFHHQIERG NPLRIFKGMA FTPQ