| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0181 |
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| Symbol | speD |
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| ID | 6485087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 196353 |
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| End bp | 197147 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642735618 |
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| Product | S-adenosylmethionine decarboxylase |
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| Protein accession | YP_002039400 |
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| Protein GI | 194445698 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.515006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 97 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAAGC TGAAACTGCA TGGCTTTAAC AATCTGACGA AAAGCCTGAG TTTTTGTATT
TACGATATCT GCTACGCCAA AACCGCAGAA GAGCGCGATG GCTATATCGC CTATATCGAT
GAACTCTATA ACGCCAACCG ACTGACCGAG ATCCTGTCGG AGACCTGCTC CATTATCGGC
GCGAACATCC TGAACATCGC CCGTCAGGAT TATGAACCCC AGGGCGCCAG CGTCACGATT
CTGGTGAGCG AAGAGCCGAT CGACCCGAAA CTTATCGATC AAACCGAACA TCCCGGCCCG
CTGCCGGAAA CCGTGGTGGC GCACCTCGAT AAGAGCCATA TCTGCGTGCA TACCTATCCG
GAAAGCCATC CGGAAGGCGG GCTATGCACC TTTCGCGCCG ACATCGAAGT GTCAACCTGC
GGGGTGATTT CACCGCTAAA AGCGCTCAAT TACCTGATCC ACCAGCTAGA GTCCGATATC
GTCACCATCG ATTACCGCGT GCGCGGCTTT ACACGCGACG TCAACGGTAT GAAGCACTTT
ATCGATCATG AGATTAATTC TATTCAGAAT TTTATGTCGG AAGATATGAA GTCGCTGTAT
GACATGGTGG ATGTAAACGT GTATCAGGAA AATATTTTCC ATACCAAGAT GCTGCTTAAA
GAGTTCGATC TTAAGCACTA CATGTTTCAC ACCAAACCGG AAGATCTCAC TGAAACCGAA
CGCCAGGAGA TCACCGCCGC GCTGTGGAAA GAGATGCGCG AGATTTACTA CGGCCGCAAT
ATTTCTGCGG TCTGA
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| Protein sequence | MKKLKLHGFN NLTKSLSFCI YDICYAKTAE ERDGYIAYID ELYNANRLTE ILSETCSIIG
ANILNIARQD YEPQGASVTI LVSEEPIDPK LIDQTEHPGP LPETVVAHLD KSHICVHTYP
ESHPEGGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTIDYRVRGF TRDVNGMKHF
IDHEINSIQN FMSEDMKSLY DMVDVNVYQE NIFHTKMLLK EFDLKHYMFH TKPEDLTETE
RQEITAALWK EMREIYYGRN ISAV
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