| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0142 |
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| Symbol | ddl |
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| ID | 6485487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 154393 |
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| End bp | 155313 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642735580 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_002039362 |
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| Protein GI | 194444863 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0090881 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA AAATCGCGGT CCTGTTGGGC GGAACCTCTG CGGAGCGGGA CGTTTCGTTA
AATTCCGGCG CGGCAGTGTT GGCCGGGTTA CGTGAAGGCG GTATTGATGC GCATCCCGTC
GATCCGCAAG AGGTCGATGT CGCGCAGCTT AAAGCAATGG GCTTTCAGAA GGTCTTTATT
GCGTTGCATG GCCGCGGCGG TGAAGATGGC ACCTTACAGG GAATGCTTGA ACTGCTCGGC
CTGCCTTATA CCGGCAGCGG CGTGATGGCC TCGGCGCTTT CCATGGATAA ACTGCGCAGT
AAATTGCTGT GGCAGGGCGC AGGCTTACCG GTTGCGCCGT GGGTCGCGCT GACGCGCGCT
GAGTTTGAAA AAGGCCTTAG CGAAGAACAA AAAGCGCGAA TTTCGGCGCT GGGTTTACCG
CTGATCGTCA AACCCAGCCG TGAAGGCTCC AGCGTCGGTA TGACGAAAGT AGTAGAAGAA
AATGCTTTAC AGGGTGCGTT ATCATTGGCT TTTCAGCATG ATGACGAAAT ACTGATTGAG
AAATGGCTGT GCGGTCCGGA ATTTACGGTG GCGATAGTTG GCGAAGAAAT TTTACCGTCA
ATTCGTATCC AACCGGCAGG AACCTTCTAT GATTATGAGG CGAAGTATCT CTCTGATGAG
ACTCAGTATT TCTGCCCTGC CGGTTTAGAT GCGTCCCAGG AAGCCGCGCT ACAGTCTCTC
GTCCTGCAGG CATGGAAAGC TTTAGGCTGC ACGGGATGGG GGCGTATTGA CGTCATGCTG
GACAGCGATG GTCAGTTTTA TCTGCTGGAA GCCAATACTT CTCCGGGGAT GACCAGCCAT
AGTCTGGTGC CGATGGCGGC GCGTCAGGCG GGAATGAGCT TCTCGCAGTT AGTGGTACGA
ATTCTGGAGT TGGCGGACTG A
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| Protein sequence | MADKIAVLLG GTSAERDVSL NSGAAVLAGL REGGIDAHPV DPQEVDVAQL KAMGFQKVFI
ALHGRGGEDG TLQGMLELLG LPYTGSGVMA SALSMDKLRS KLLWQGAGLP VAPWVALTRA
EFEKGLSEEQ KARISALGLP LIVKPSREGS SVGMTKVVEE NALQGALSLA FQHDDEILIE
KWLCGPEFTV AIVGEEILPS IRIQPAGTFY DYEAKYLSDE TQYFCPAGLD ASQEAALQSL
VLQAWKALGC TGWGRIDVML DSDGQFYLLE ANTSPGMTSH SLVPMAARQA GMSFSQLVVR
ILELAD
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