| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0096 |
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| Symbol | pdxA |
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| ID | 6486610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 103446 |
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| End bp | 104435 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642735539 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_002039321 |
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| Protein GI | 194446479 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.028017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.214975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGTG CGCAACGCGT TGTTATCACT CCCGGCGAAC CCGCCGGGAT TGGCCCCGAT
CTTGTCGTCC AACTGGCGCA ACGCGCGTGG CCGATTGAAC TGGTCGTCTG TGCGGACGGC
GCGCTCCTGA CGGAGCGGGC CGCCATGCTC GGCCTGCCCC TCTCGCTTCT CCCTTACTCG
CCTGATGTCC CCGCTGCGCC GCAGCCCGCG GGAACGCTGA CCCTATTGCC GGTCTCGCTG
CGCGCGCCTG CCATCCCCGG TCAGTTGACG GTAGAAAATG GCCCCTACGT GGTAGAGACG
CTGGCGCGAG CGTGTGATGG CTGTCTGAAC GGTGAATTTG CCGCGCTGAT CACAGGCCCC
GTGCACAAAG GCGTTATTAA CGACGCAGGC ATTCCGTTTA CCGGTCATAC CGAGTTTTTC
GAAGAGCGTT CGCAGGCGAA AAAAGTCGTG ATGATGCTGG CAACCGAAGA ACTTCGCGTG
GCGCTGGCGA CCACGCATCT GCCGCTACGG GCGATTGCAG ACGCCATCAC CCCTGCGCTT
TTGCACGAAG TGATTGCTAT TTTGCATCAC GATTTGCGGA CCAAATTTGG TATTGCCGAA
CCGCGCATTC TTGTCTGTGG CCTGAATCCG CACGCGGGCG AAGGCGGTCA TATGGGCACG
GAAGAGATAG ACACCATCAT TCCGGTGCTC GACGAGCTGC GGGCGCAGGG AATGAAACTC
AACGGGCCGC TACCTGCTGA TACGCTGTTT CAGCCCAAAT ATCTCGATAA TGCCGACGCG
GTGCTGGCGA TGTACCACGA TCAGGGCCTG CCCGTGCTAA AATACCAGGG ATTCGGTCGG
GGAGTGAATA TTACGCTCGG CCTACCTTTT ATTCGAACCT CCGTTGACCA CGGCACCGCG
CTTGAACTGG CGGGCCGTGG AAAAGCGGAT GTCGGCAGTT TTATTACGGC GCTTAATCTC
GCCATCAAAA TGATTGTTAA TACCCAATGA
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| Protein sequence | MSSAQRVVIT PGEPAGIGPD LVVQLAQRAW PIELVVCADG ALLTERAAML GLPLSLLPYS
PDVPAAPQPA GTLTLLPVSL RAPAIPGQLT VENGPYVVET LARACDGCLN GEFAALITGP
VHKGVINDAG IPFTGHTEFF EERSQAKKVV MMLATEELRV ALATTHLPLR AIADAITPAL
LHEVIAILHH DLRTKFGIAE PRILVCGLNP HAGEGGHMGT EEIDTIIPVL DELRAQGMKL
NGPLPADTLF QPKYLDNADA VLAMYHDQGL PVLKYQGFGR GVNITLGLPF IRTSVDHGTA
LELAGRGKAD VGSFITALNL AIKMIVNTQ
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