Gene SNSL254_A0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0019 
Symbol 
ID6486391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp17037 
End bp17480 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content39% 
IMG OID642735464 
Producthypothetical protein 
Protein accessionYP_002039246 
Protein GI194443995 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.644907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT ATATCATTAA TAGCAATTGC ATTTACAATG AAGGTAAATA TGAACTGAGG 
ACGGTCTCAA ATTCACAGGT TATTAAAATG ACTGCGATGA GAGCCAAATG TCTCAGTTTC 
ATCATCGAGA ATGCTCATCT GGAGATTATC GAGCGACAAA AAATAACCAC TGCGTTATGG 
GGAAGTCGAA GCCATTATGT TAATGATGCA AATCTAACGC AGATTCTCTA TTTAATCAGA 
CGTGACCTTA AAGCGCTGGG TATTAACGAT CTTTTTATTA CCATTCCAAG ACAAGGTCTC 
AAAGTGAATA GTGATATCAC CATTATCGCG ACGGATAGCG AAACAAAGGG AAGAAAAAAA 
CAGATTGTAC GGCAAACCAT CGCCGCCCTG ACGACCGTAT TTTCAGTAAC GTTAGGTTCT 
CTCATGTATC TGCATATTCA CTAA
 
Protein sequence
MKTYIINSNC IYNEGKYELR TVSNSQVIKM TAMRAKCLSF IIENAHLEII ERQKITTALW 
GSRSHYVNDA NLTQILYLIR RDLKALGIND LFITIPRQGL KVNSDITIIA TDSETKGRKK 
QIVRQTIAAL TTVFSVTLGS LMYLHIH