| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP2474 |
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| Symbol | hsdR |
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| ID | 3242316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 2527339 |
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| End bp | 2530131 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637169148 |
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| Product | type I restriction-modification system, R subunit |
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| Protein accession | YP_190017 |
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| Protein GI | 57865914 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.081777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTATC AAAGTGAATA TGCATTAGAA AATGAAGTGC TTCAACAACT TGAAAATTTA
GGATATGAAC GAGTAAACAT ACATAACGTT GAACAATTAC ATGATAATTT TCGTACTATA
ATTAATGAAC GTCATAAGGA AAAATTAAAT GGAAAACCCC TAACAGACCG TGAGTTTGAA
CGTTTAATGA CGGGGATTAA CGGTAAATCT GTATTTGATA GTGCGATGCA ATTACGCGAT
AGTTATGTAC TTAAGCGTGA TGATGATACT GATTTATACC TAAATTTCAT GAACTTAAAA
CAATGGTGTC AGAATAAATT CCAAGTAACC AATCAAATCA GTGTGAAAGA TAAATATAAA
AGCCGTTATG ATGTGACAAT TTTGATTAAT GGCTTGCCAT TAGTACAAAT TGAGTTAAAA
CGAAGCGGTG TAGCAATTAC CGAAGCATTT AATCAAATAG AACGATATCG TCGTCAAAAC
TATACTGGTT TATTCAGATA CATACAATTA TTTGTTGTTA GCAATAAAAT GGAAACGCGC
TACTATGCCA ACAGTGATCG TGAAATTTTC AAAGGACAAA TGTTTTATTG GAGTAATGAA
CAAAATGAGC GTATTAATTA TCTTAAAGAC TTTATTGAAG ATTTCTTAGA ATCATGTCAC
ATTTCTAAGA TGATTAGTCG TTATATGGTC GTCAATGAAA CAGACAAATT TCTAATGGCA
TTACGTCCTT ATCAAGTATA TGCAGTGGAA GCTATTTTAA ATCGTGCGTT AGAAACAAAT
AACAATGGTT ACATTTGGCA TACAACAGGT AGTGGTAAAA CGCTGACTTC GTTTAAAGCG
AGTCAATTAT TATCGCAAGA AGAAAATATT AAGAAAGTGA TTTTCTTAGT TGATCGTAAG
GACTTAGATA ATCAAACCTT AGCTGAATTT AATAAATTCC AAGAGGACTC AGTTGATTTT
ACGGATAATA CACGTAAATT ATTGAAACAA CTTGCCGATC CAACTTTACC TTTAATTGTT
ACAACGATTC AAAAAATGGC GAATGCAGTA AAATCCAATC ATTCAGTAAT GGAATCATAT
AAACAAGATA AAGTCATTTT TATTATTGAT GAGTGTCATC GTACGCAATT TGGAGATATG
CATCGTTTGA TTAAGCAACA TTTTGAAAAT GCACAGTATT TTGGATTTAC GGGGACACCA
CGTTTTGAAG AAAACAAGAG TCAAGACGGG CGTGCTACAG CTGACATTTT TGATAAGTGT
CTACATCACT ATCTCATTAA AGATGCTATT AGAGATCATA ATGTCCTTGG ATTTTCCGTT
GAATACAATC AAACATTTAA TTCACATGAA GATTTAGATG AAGAATATAT TTCTAAAATT
AATACGTCGG AAATTTGGAT GGCAGATGAA CGTATTGAAG CTGTTTGTCG ACATTTGATT
TCAAATTATC ATAAGAAAAC AGATAACGGA AATTATACAT CTATGTTTGC GGTTCAAAGT
ATTCCAATGG CGATTAAATA TTATGATACC TTCCAAAGAC TAAAAAACGA AGGTGTTCAT
GATTTAAATG TTGCAACTAT TTTTACATAT CAAGCCAATG AAGATGCGCA AGAGGATGAA
AATCATGTTC ATTCAAGAGA AGTTCTCGAC CGCATTATGA ATGATTATAA TCAAACATTT
AAAACGAACT ATAATACGGA TAATTTCGAA GGCTACTTTT CTGACGTATC TAAGCGTATG
AAAGAAGTTG TTCGTGATGA CAAAATTGAT ATTCTTATCG TCGTTAATAT GTTTTTGACT
GGTTTTGACA GTAAGAAACT GAATACCCTT TACGTTGATA AAAACTTGAA GCATCATGAT
TTAATTCAAG CCTATTCAAG AACAAATCGT GTTGAAAAAG AACGTAAGCC ATACGGTAAT
ATTGTATGTT ATCGTGATTT AAAAAAACAA ACGGACGAAG CCATTGAAAT TTTCTCTCAA
ACAGATAATA CAGATACGGT GTTAAGCTTA TCTTACGAAG AATACTTAGA TAATTTCAAA
GATATCTTAC AAGACGTTTT TCAACTAGCG CCAACGCCTT TAGATGTCGA TAAACTAGAG
GCTGAAGATT TAAAAAAAGA GTTTGTCATT TCATTCCGTG ATTTATCAAA TACACTAATT
AAACTAAAAA CCTTTGATGA ATTTCAATTT ACAGAAGACG AACTTGGCAT TGCAGAACAA
ACCTATGAAG ATTATAAAGG TAAATACTTA AATATTTATG AAGAAGTCAT GCGTGGTAAA
AAAGTGGATG GTGAAGAGGG TGTTTCCGTT TTAGATGATA TTGATTTCCA AGTTGAATTA
ATGCGTAATG ATTTGATTAA TGTGAAGTAT ATTATGGATC TCATTGGTCA AATTAATCTA
TCTGATGCAA AAGCACGCGA TGAAAAACGT CATCAAATTC ATAAGTTGTT AGATAAAGCA
GATGATCAAC AATTACGTTT AAAAGCTGAT CTCATTCGTA GCTTCTTAGA TAAAGTTGTG
CCATCACTAA AAGAAGATTC TGATATTAAT GAAGCGTATT ATGAATTTGA AGACAAAGAA
AAAACGAAAG AAATTGATGC ATTTGCAGAA CAAAAAGCCT TTTCTGCTAT GTTACTTAAC
GAAGCTGTTA ATGAGTATGA ATATAGTGGT AATATTGACC GTAAATCTAT CGGTCAAAAT
ATTTCAGAAC CTTTTATGAA ACGTAAAAGA AAAACCGACC AAATTATACA GTTTATCGAA
GATACAGTAG AAAAGTACGG TGTTGTCGAA TAA
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| Protein sequence | MVYQSEYALE NEVLQQLENL GYERVNIHNV EQLHDNFRTI INERHKEKLN GKPLTDREFE
RLMTGINGKS VFDSAMQLRD SYVLKRDDDT DLYLNFMNLK QWCQNKFQVT NQISVKDKYK
SRYDVTILIN GLPLVQIELK RSGVAITEAF NQIERYRRQN YTGLFRYIQL FVVSNKMETR
YYANSDREIF KGQMFYWSNE QNERINYLKD FIEDFLESCH ISKMISRYMV VNETDKFLMA
LRPYQVYAVE AILNRALETN NNGYIWHTTG SGKTLTSFKA SQLLSQEENI KKVIFLVDRK
DLDNQTLAEF NKFQEDSVDF TDNTRKLLKQ LADPTLPLIV TTIQKMANAV KSNHSVMESY
KQDKVIFIID ECHRTQFGDM HRLIKQHFEN AQYFGFTGTP RFEENKSQDG RATADIFDKC
LHHYLIKDAI RDHNVLGFSV EYNQTFNSHE DLDEEYISKI NTSEIWMADE RIEAVCRHLI
SNYHKKTDNG NYTSMFAVQS IPMAIKYYDT FQRLKNEGVH DLNVATIFTY QANEDAQEDE
NHVHSREVLD RIMNDYNQTF KTNYNTDNFE GYFSDVSKRM KEVVRDDKID ILIVVNMFLT
GFDSKKLNTL YVDKNLKHHD LIQAYSRTNR VEKERKPYGN IVCYRDLKKQ TDEAIEIFSQ
TDNTDTVLSL SYEEYLDNFK DILQDVFQLA PTPLDVDKLE AEDLKKEFVI SFRDLSNTLI
KLKTFDEFQF TEDELGIAEQ TYEDYKGKYL NIYEEVMRGK KVDGEEGVSV LDDIDFQVEL
MRNDLINVKY IMDLIGQINL SDAKARDEKR HQIHKLLDKA DDQQLRLKAD LIRSFLDKVV
PSLKEDSDIN EAYYEFEDKE KTKEIDAFAE QKAFSAMLLN EAVNEYEYSG NIDRKSIGQN
ISEPFMKRKR KTDQIIQFIE DTVEKYGVVE
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