Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2029 |
Symbol | |
ID | 3241089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2049064 |
End bp | 2050008 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637168715 |
Product | amino acid ABC transporter, amino acid-binding protein |
Protein accession | YP_189585 |
Protein GI | 57865409 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0774911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGAAGT ATCTTAACTA TACACTGATT CTGATTGCAT TATCTCTCAT CGTGTTATCT GGATGCAGTT TACCAGGCTT AGGTGATGGA AATGCTAAAG ATGATGTGAA AATTACAACG ACTGAAACAA GTGAAACTAA GATTATAGGT CATATGGAAA AATTATTAAT TGAACATGAA ACTGATGGAA AAATCAAACC GACGTTAATT GGTAACCTAG GGTCTAGCAT TATTCAACAT AATGCGTTAC AACGTGGAGA TGCAAATATG TCAGCGGTAC GTTACACAGG TACTGAATTG ACGAGTGTAT TAGCAGCTAA ACCTACTAAA GATCCTGATA AGGCCATGTC TGAAACACAA CGCTTATTTA AAAAGAAATA TGATGAAAAG TATTATCATT CACTTGGGTT TGCGAATACA TACGCATTCA TGGTGACAAA AGAAACGGCT AAAAAGTATC ACTTAAAAAA AGTATCAGAC TTAGAGAAAT ATAAAGATGA ACTACGTCTT GGAATGGATA CCCAATGGAT GAACCGTGCA GGTGATGGAT ATCCTGCTTT TGTTAAAGAT TATGGATTTA AATTTGATAG TGCGCGTCCA ATGCAAATTG GTTTAGTATA TGATGCATTA AAAAATAATA AATTAGATGT AGCAGTTGGG TATTCAACAG ATGGACGTAT TGCAGCTTAT GATTTGAAAA TATTGGAAGA TGATCGCAAA TTCTTCCCGC CTTATGACGG TAGTCCACTT GCAAATGAAC AATTAATAAA GGATAATCCA GAAATCGATA AGGCACTAAA AAAATTAGAA GGTAAAATCT CAACAGAAGA AATGCAGAAG TTAAATTATG AAGCGGATGG AAAAGGTAAG GAACCTGCAG TGATAGCTGA AGAATATTTA AAGAAACATC ATTACTTTGA AGAAAAGAAA GGTGGTCATA AGTAA
|
Protein sequence | MKKYLNYTLI LIALSLIVLS GCSLPGLGDG NAKDDVKITT TETSETKIIG HMEKLLIEHE TDGKIKPTLI GNLGSSIIQH NALQRGDANM SAVRYTGTEL TSVLAAKPTK DPDKAMSETQ RLFKKKYDEK YYHSLGFANT YAFMVTKETA KKYHLKKVSD LEKYKDELRL GMDTQWMNRA GDGYPAFVKD YGFKFDSARP MQIGLVYDAL KNNKLDVAVG YSTDGRIAAY DLKILEDDRK FFPPYDGSPL ANEQLIKDNP EIDKALKKLE GKISTEEMQK LNYEADGKGK EPAVIAEEYL KKHHYFEEKK GGHK
|
| |