| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1972 |
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| Symbol | |
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| ID | 3242500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 1990253 |
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| End bp | 1992358 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637168658 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_189528 |
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| Protein GI | 57865431 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000433091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATGTT TTTTAAATAT ATATAAAGAA TATCATTCTC CCCCTGAACG CAATATTAAT
AGAATTATTC TGATGTTTTC ACTTACAAAT GACTTAAAAA TCACTATTAA TGGTGAAACA
AAAGATTTAG GTAATCATAT AGCTATCATT AATCAATCTG ACATCTATTT TATTAATAGT
GCTTCAAATC TCGTATTACT CTCTATTCCA GTTATTTATT TTTATAGTAA AGATAATAAA
TTTTTTAAAT GTTATTTTGA CAGACATTTA TTACAATCAA GCAGTTTTGT TAAAACAATT
ATTTTACAAG CTATTCAACA TTTAATAAAA GGAGAAAATC AAGATGAGCA ATCCATCTCT
AAAATAATAC AAACGCTACT AAAAGAAGCA GTCATTCGAT ATAAGAAAAA ATATATTCCT
CAAATTGCAG TTAATCATTC AGTGTTTACT GAAGGATTAA CATTTATTCA TTCAAAAGTA
TCACAGTCAC TTTCACTACG AGAAGTAGCT CAACATTGTA ATATATCTGA ATCTTATTGT
TCTAACCTAT TTGCAAGATA TCTTAATATG AATTTTAAAG ATTATTTTAC AAGCTTAAAA
GTGATTGACT CTATAAAAAG GCTACTTTCA TCTGAGGACT CAATTAACGC TATTTCAGAA
CAATCTGGAT TTAGTAGTCA TACCAATTTT ACAAATCAAT TTAAAAATTA TTTAGGTTGT
AGCCCAAAAC AATACCGAAC GATTATCTCT AAGTTAGACT CCTTACCTTC GATAAGTTTT
AGTGATACTG ACTTTTCACA ATATATTGAT TTAATTAATC AATTTGAGTT TAGTGATCAT
TTGGCTACTG AAACGACTGA AAGAGATATC AATGAATTTT ATCCTCAAGA TCAGACTAAA
AACTCTAAAG CGTTTATACG TTTTCAAAAT TTCAACGAAT TATTTCAATT TGTTTTTAAT
GAATATTACA ACATTGATTT TACCTCCCTG CCACAAGCTG TAATTTTTAT CAATGATATC
ACTGATATTT CGACGCGAGA GGTGAACTTT AATTTATTAA ATCGATGCTT TGAAAAATTA
TTCGAAAAAA ATATAGGTTT AGCCATGAGA TTAACATCTA CAAATGAATT TGAATCTATC
AAAGAAATAA TTTTATTATT TCTTAATAGC CACCAAGATT ATAAAATGAA CAAAAAAATG
GTTAAATTTA TGTTAGTCTT TGAAACTAAG AATATGTCAG TGAACGATAT ACATTTATGC
CATTTAAAAA TTAAAAATAA AAATAAAGCT ATCCGTTATA GTATAACTGT TGAAGGATTA
CTACACCAAA ATTCTTCTAT TGATCGAACT TATGATATGA TGAAGCGATT AAATTTCGAT
TACTATTTTA TAGACATTGA AAATCTAGAA ACCAAAAACT CATTAATTAC CAAACGTAAA
TCGTACTTAC ATTCGTCCAC ACACTTTGAA AATTATAAAC AATTTATATT AGATTCCGGT
ATACCTTCAA CTAAATTTGT TTACAATAAT TTATCTTTAA AGTGTTTTAA ATATACAAAC
AATGGTACTT ATCCACTTCA ATTATCTGAC CTTGTTTGTC ATTTAGTCGC ATTAATGCGT
TACGGGGGTG GTGTAAGTTA TCAACTGATA GAAGATGAGA GTCCTTTTAT TGCCTTATTT
AATCGTTATG GTAGTCCCCT ACCTCTCATG CACCTCTATA AATTAATCGA ACCATTTTTA
AATGAACCTT TAGAGATAGC TAACAATTTT TTAATGAGTC GCAAAGATGG TAACTATCAC
TTTTTATTAT TTAATAAAAT AAATGATCGT TATCTATCTG ATAGTCAACA GCGCTACGTT
TTTAAAAATA CATTATCAAC CAACTCATTA ATTATTATTA AAACGTTAAA TCATGAGCAT
GGCGCAATTC AAAACCTTCT ACCACAAACT AAACAACAAT TTTATATTGA ACGTAGTATT
CTTGATGAAC TTGATAAATC AAATCAACCA AAAACAGAAT TAGCTATACA ACATGACCAT
CATCTTCCTT TCCAAGTCAC CTTAAAACAC GATGAAGTCA AATATATTTG TTTTAAACCT
TCTTAA
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| Protein sequence | MTCFLNIYKE YHSPPERNIN RIILMFSLTN DLKITINGET KDLGNHIAII NQSDIYFINS
ASNLVLLSIP VIYFYSKDNK FFKCYFDRHL LQSSSFVKTI ILQAIQHLIK GENQDEQSIS
KIIQTLLKEA VIRYKKKYIP QIAVNHSVFT EGLTFIHSKV SQSLSLREVA QHCNISESYC
SNLFARYLNM NFKDYFTSLK VIDSIKRLLS SEDSINAISE QSGFSSHTNF TNQFKNYLGC
SPKQYRTIIS KLDSLPSISF SDTDFSQYID LINQFEFSDH LATETTERDI NEFYPQDQTK
NSKAFIRFQN FNELFQFVFN EYYNIDFTSL PQAVIFINDI TDISTREVNF NLLNRCFEKL
FEKNIGLAMR LTSTNEFESI KEIILLFLNS HQDYKMNKKM VKFMLVFETK NMSVNDIHLC
HLKIKNKNKA IRYSITVEGL LHQNSSIDRT YDMMKRLNFD YYFIDIENLE TKNSLITKRK
SYLHSSTHFE NYKQFILDSG IPSTKFVYNN LSLKCFKYTN NGTYPLQLSD LVCHLVALMR
YGGGVSYQLI EDESPFIALF NRYGSPLPLM HLYKLIEPFL NEPLEIANNF LMSRKDGNYH
FLLFNKINDR YLSDSQQRYV FKNTLSTNSL IIIKTLNHEH GAIQNLLPQT KQQFYIERSI
LDELDKSNQP KTELAIQHDH HLPFQVTLKH DEVKYICFKP S
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