Gene SERP1725 details

Gene Information

• Locus tag: SERP1725
• Symbol: prfA
• ID: 3242706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 1762086
• End bp: 1763162
• Gene Length: 1077 bp
• Protein Length: 358 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637168410
• Product: peptide chain release factor 1
• Protein accession: YP_189289
• Protein GI: 57867593
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00127994
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTGATC AATTAGATAT AGTAGAAGAA CGATATGAAC AATTAAATGA ATTACTGAGT 
GATCCTGATG TCGTGAATGA CGCTGATAAA TTAAGAAAAT ATTCAAAAGA ACAAGCTGAC 
TTACAAAAGA CTGTTGATGT GTACAGAAGT TATAAAACCA AAAAAGAAGA ATTACAAGAT 
ATTGAAGATA TGCTAAATGA AACATCTGAT AAAGAAGAAG TTGAAATGCT AAAAGAAGAA 
AGTAGTGCTT TAAAAACAGA ATTACCTGAT ATGGAAGAAG AATTAAAAAT CTTACTTATA 
CCTAAAGATC CTAATGATGA TAAAGATGTT ATAGTTGAAA TCCGTGCAGC TGCAGGGGGA 
GATGAAGCTG CAATATTTGC TGGGGACTTA ATGAGAATGT ATTCAAAATA CGCCGAGGCA 
AACGGATTTA AAACAGAAAT AGTTGAAGCT TCAGAAAGTG ATCATGGTGG ATATAAAGAA 
GTGAGTTTCT CAGTATCTGG TACAGGTGCT TACAGTAAAT TAAAATTTGA AAATGGTGCA 
CATAGGGTCC AACGTGTGCC TGAAACAGAA TCAGGGGGGC GAATTCACAC TTCTACCGCA 
ACTGTTGCTG TATTACCTGA AGCTGAAGAT GTCGAAATTG AGATACGTAA TGAAGATTTA 
AAAATTGATA CTTATCGCTC TAGTGGTGCT GGTGGTCAGC ACGTTAACAC GACTGACTCT 
GCAGTGCGTA TTACACACTT GCCGACTGGT GTTATAGCAA CTTCTTCTGA AAAGTCTCAA 
ATTCAAAACC GAGAAAAAGC TATGAAAGTT TTAAAAGCAC GATTGTATGA TATGAAATTG 
CAAGAAGAAC AACAAAAATA TGCTTCTCAA AGAAAATCAG CTGTTGGTAC AGGTGATCGT 
TCTGAAAGAA TAAGAACTTA TAATTATCCT CAAAGTCGTG TGACAGATCA TCGAATTGGT 
TTAACGCTTC AAAAGTTAAA TCAAATCATG GAAGGAAATT TAGACGAGAT TGTGGAGGCA 
CTCACACTTT CAGAACAAAC TGAGAAACTG AAAGAATTAA ACAATGGTGA ATTATAA 

 

Protein sequence

MFDQLDIVEE RYEQLNELLS DPDVVNDADK LRKYSKEQAD LQKTVDVYRS YKTKKEELQD 
IEDMLNETSD KEEVEMLKEE SSALKTELPD MEEELKILLI PKDPNDDKDV IVEIRAAAGG 
DEAAIFAGDL MRMYSKYAEA NGFKTEIVEA SESDHGGYKE VSFSVSGTGA YSKLKFENGA 
HRVQRVPETE SGGRIHTSTA TVAVLPEAED VEIEIRNEDL KIDTYRSSGA GGQHVNTTDS 
AVRITHLPTG VIATSSEKSQ IQNREKAMKV LKARLYDMKL QEEQQKYASQ RKSAVGTGDR 
SERIRTYNYP QSRVTDHRIG LTLQKLNQIM EGNLDEIVEA LTLSEQTEKL KELNNGEL