Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1645 |
Symbol | |
ID | 3241639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1682429 |
End bp | 1685098 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637168326 |
Product | hypothetical protein |
Protein accession | YP_189210 |
Protein GI | 57867518 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCATATT TTAATAATGT CTATACGTTA AAATTAGATA TCAAGCAACA AAACCCTAAC CCAGTAATTC GTATTGTTCA ATATGACTCA GCTGTTTTTA AAATAGAGTT ATATGATAAT GGACGAAAAA TAGATATCAA AGATGGCGAG AGATTTACGG TTAGTGTAGA ACATGAGGCT ACTGGTGAAA CTCATTCTGG TATCGCTAAA TACGATGGTG AACAATTTGT TGTTTATGAT TTAAGAAAAG CTGATATGAA AAATATTGGT ACATATAGAG CAAGATTTGC CTCTTATAAA GATAGAAACC GTGTTTCTTC ACTAATGTTC AGATATGAAG TTTATGAAGA TTATGAAACT GTTGGAGACG CTAGTGAATT AACTATGCTC CAAGAACTAT TCCAAGAAGT TGAAGAAGTT GGAAGAGTTA CACAACGTCA AGGTGAATAT GCTGAGGATC GTGGAGATTA TGCTAATGCA GCTGGTGACT ATGCAAACCG TGCTGGAGAC TCTCAGATTA TGAATTGGCT ACCTTACGTT AAGACCTTAG CTGAAAGAAA TAAACTATAT CCAAACCCGG AAAACGGCGA TACTGTTTAT GTTATTGATG AAAATAAAGT ATTCAGGTAT GACGGAATTG ACGCATTAGA CTGGGAAGCA ATTTCTGGAT ATGACACTTC AGTTATTCAA GACATTTATA ATACTAAAGA AGATAAAACA GTTGTTGCTA AATTAAGAGA AGATTTAAAT TCATTAACTA TTGGTGCTAG AAACTTACTC ACAGGTACAG ATTTCGAAAA ACCTATGAAT TTAAAATATA CCTCACCTAC CTTTACTTTC ACTCAAAATA AATCAGACTC ATCTATGACA TTAGCCCCTA CTGATAAATA CGTTTCAACT TCTGCTGTAT ACTTTGATTT AGAAAAAGAA GCTCTCGAAA ATAATTTCTT TACCCTTTCA TTTAACGTAA AAGTATTAAG TGGTAGTGCT ACACTCAAGT TTAAAGTTGG TGACGCTGCT TATTCTGAGC CTGTTACTGT AAAAGCTTCA TCTAATTACC AACGTGTAGT ATTAACTGCT TCAACTCAAG ATTTAAAAAC GAATAAAACT AACCTTTTAT TGCAAACTAC AAGTGCTATT GCCATTGAAA AAGAAAGCTT TAAAGCAGAA ATCGGTAATA GAGCAACTAC TTGGACACCT TCTTATCTAG ATGTAAAAAC AAAACTGGAT GACTATGGTA CTAGAATTAA AGGTTTAGAA GTTGAAATGA ACACAAACGT AGTTAAGAAA TCGGTCTATG AAGCTGATAA ATCTAAAAAT GAAGAGAAGC TCAGTAAGAT TATACAAGAC GCTAATAGTT TAACATCTAT CGTTTCTAAG AAAGTTGATA AAGGTCAAGT TAAATCTATG ATCAACCAAA CTGCTGAACG TATCAAAATT AAAGCAAGTA ATATTGATTT TGATGGAGTA GTTGTATTCA AAAACAGAAA CAATAAGATT GATCCTAACG CTTTTGTAAG AATTAACGGT GGAGAATTAA CTGCTAAAGG TTACTACCGA AGAGTATGGC GTGATGGTAA AGCTCGTAAC CGTGTTCAAG TTGTTCAACT TACAGACGGA ATGCTAAGAA TTTCCGATCC AAAAGGTGAC TTAGTTGACT CAACAAAAGA TAGAGACTAT CGCTATGATA TTGATGTTAA TGGTAAGAAA GTTTATAGTA CAGTTCGTTC TCTTTACTAT TCTTCAGATG GTGTCTCTAC TTACCGTGAC GGTTCTGGTA AAGCATTTAA TAAAGAAGGT AAAGTAGTTT CTTCTGGTAC TATCGAATTC TTCTCACATG AATATTCTAG AAGTCGTGGT TTAACATTAT ATTCTGCTGG TGGTGCAATT GGTTTACAAG CAGCTAACAA TGCTATTCAT ATTGACGCAG CGGCTACTTT ATATAATCGT TCAAGACAAG CTAATGTAAT AATTCGACCT CATGAGAACG TTCGTAAAGG TATCAACGAC TTCAAATTTG GTATTAGTGC TGATAATACA GGTAGACTTG TTTATGGTGA TGAAAGTAAA CGTTTAGGTG TAGGACTTAG ATTTTCTAAA TCATCTAAAA ACAAAGTAAT TACAGGTATT GACTCAACTG GACGTGCTAG TTCAGATGTA CGTTTGGAAA TTGGTGAAGT AAGAGCTAAC AAAATTTTAT CAAGAGATGG TAAGGAAACA GTTTACTTCA ACAATGCTGG TAGTGGTAAC TTAACTCAAT CAGCTACTTT ACGTGCTGGC GGTATCAAAA CTAATGCAAC TAACTTCTAT GTTGGTGTAC GTGGTGAACT ACGTGTTACT AATACTAGAG GTGCTAACTT TGGTAAAGGT ATTGGTTACA TGCCTGTAAG AGCAAGTAAA TTTAACTCTG TATCTAGTAG AAAATATAAA ACAAATATTA AAGATTTAGA AATTAATTCT TTAGATGTTT TGAATTCTAC TGATATTAAA CAATACAATC TTAAATCTGA TTTAAATGAC GGTATCGACA AAGTTAAATA TGGTGTGATC CTTGAAGACT CTCATGACGC TTTAAAAGAA GGAGACGCAA TTGACGTTTA TACTATGACT TCTATCCTTT GGGATGTTGT TAAAAAGCAA CAAAAAGAAA TCGAGCAATT GAAAAAATAA
|
Protein sequence | MSYFNNVYTL KLDIKQQNPN PVIRIVQYDS AVFKIELYDN GRKIDIKDGE RFTVSVEHEA TGETHSGIAK YDGEQFVVYD LRKADMKNIG TYRARFASYK DRNRVSSLMF RYEVYEDYET VGDASELTML QELFQEVEEV GRVTQRQGEY AEDRGDYANA AGDYANRAGD SQIMNWLPYV KTLAERNKLY PNPENGDTVY VIDENKVFRY DGIDALDWEA ISGYDTSVIQ DIYNTKEDKT VVAKLREDLN SLTIGARNLL TGTDFEKPMN LKYTSPTFTF TQNKSDSSMT LAPTDKYVST SAVYFDLEKE ALENNFFTLS FNVKVLSGSA TLKFKVGDAA YSEPVTVKAS SNYQRVVLTA STQDLKTNKT NLLLQTTSAI AIEKESFKAE IGNRATTWTP SYLDVKTKLD DYGTRIKGLE VEMNTNVVKK SVYEADKSKN EEKLSKIIQD ANSLTSIVSK KVDKGQVKSM INQTAERIKI KASNIDFDGV VVFKNRNNKI DPNAFVRING GELTAKGYYR RVWRDGKARN RVQVVQLTDG MLRISDPKGD LVDSTKDRDY RYDIDVNGKK VYSTVRSLYY SSDGVSTYRD GSGKAFNKEG KVVSSGTIEF FSHEYSRSRG LTLYSAGGAI GLQAANNAIH IDAAATLYNR SRQANVIIRP HENVRKGIND FKFGISADNT GRLVYGDESK RLGVGLRFSK SSKNKVITGI DSTGRASSDV RLEIGEVRAN KILSRDGKET VYFNNAGSGN LTQSATLRAG GIKTNATNFY VGVRGELRVT NTRGANFGKG IGYMPVRASK FNSVSSRKYK TNIKDLEINS LDVLNSTDIK QYNLKSDLND GIDKVKYGVI LEDSHDALKE GDAIDVYTMT SILWDVVKKQ QKEIEQLKK
|
| |