Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1436 |
Symbol | |
ID | 3241949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1497756 |
End bp | 1498706 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637168121 |
Product | putative lipid kinase |
Protein accession | YP_189005 |
Protein GI | 57867370 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAAC GTGCAAGAAT TATATATAAT CCAACATCAG GAAAAGAACT TTTTAAACGT GTATTACCAG ATGCACTGAT TAAACTTGAG AAGGCAGGTT ATGAAACGAG TGCATATGCA ACTGAAAAAA TTGGTGATGC TACTTTTGAA GCTGAAAGAG CACTAGAAAG TGAATATGAT TTACTCATTG CAGCTGGAGG TGACGGTACG TTAAATGAGG TGGTCAACGG AATCGCCGAA CAACCCAATC GGCCTAAATT AGGTGTAATA CCAATGGGCA CCGTTAATGA CTTTGGAAGA GCACTTCATT TACCAAGCGA TATAATGGGG GCGATTGATG TAATCATTGA TGGTCACACA ACCAAGGTAG ATATTGGAAA GATGAATAAT CGTTATTTCA TTAACCTAGC TGCAGGGGGG AAACTAACAC AAGTATCTTA TGAAACACCA AGTAAGTTGA AATCAATTGT AGGACCGTTC GCGTATTACA TTAAAGGATT CGAAATGTTA CCTCAAATGA AAGCAGTAGA TGTACGTATC GAATATGATG ATAACATCTT CCAAGGAGAA GCTTTACTAT TCCTTTTAGG TTTAACGAAT TCAATGGCTG GCTTTGAAAA ATTAGTTCCA GATGCGAAGC TTGACGACGG TTATTTCACG TTAATTATTG TAGAAAAAGC AAATCTTGCT GAATTGGGTC ATATTATGAC ACTAGCGTCT CGAGGTGAGC ATACAAAACA TCCTAAAGTC ATTTATGCTA AAGCGAAGTC TATTAATATT TCATCATTTA CTGATATGCA ACTTAATGTT GATGGTGAAT ACGGTGGGAA ATTACCTGCA AATTTCCTTA ATTTAGAACA GCACATAGAA ATTTTTACAC CTAAAGATGT ATTTAACGAA GAACTATTAG AAAATGATAC GATAACTGAT ATTACGCCTG ATAAGCAATA A
|
Protein sequence | MRKRARIIYN PTSGKELFKR VLPDALIKLE KAGYETSAYA TEKIGDATFE AERALESEYD LLIAAGGDGT LNEVVNGIAE QPNRPKLGVI PMGTVNDFGR ALHLPSDIMG AIDVIIDGHT TKVDIGKMNN RYFINLAAGG KLTQVSYETP SKLKSIVGPF AYYIKGFEML PQMKAVDVRI EYDDNIFQGE ALLFLLGLTN SMAGFEKLVP DAKLDDGYFT LIIVEKANLA ELGHIMTLAS RGEHTKHPKV IYAKAKSINI SSFTDMQLNV DGEYGGKLPA NFLNLEQHIE IFTPKDVFNE ELLENDTITD ITPDKQ
|
| |