Gene SERP1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1357 
Symbol 
ID3241458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1413267 
End bp1414268 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content32% 
IMG OID637168005 
ProductO-succinylbenzoic acid synthetase, putative 
Protein accessionYP_188928 
Protein GI57867276 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID[TIGR01928] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.190133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA AGGCAATCAA TCTATATACT TATAAGGAAC CTTTTAAATC ACCAATTTCA 
ACACCGAAAG TGAAGTTAAC GCATCGAGAA AGTTTGTTTA CGGAAATAGT AACTTATAGT
GGAGAAACTT ATTATGGAGA ATGTAATGCA TTTTTAACTA ATTGGTATGA TAAAGAAACA
ATACTCACAG TCGTAAACAG ATTAAGACAG TGGATACCGC AAGTACTTCA TAAAGATATG
ACATCTTTTG ATTCATGGTT ACCTTACCTA AATCAAATGA ATGATGCGCC AGCTGCTAGA
TCAATGGTTG TCATGGCTGT TTATCAAATG TATAACGACT TGCATGATTT TGAAGTACAA
TACGGTGCTA CAGTTAGTGG CTTAACTAAT AGTCAAATTG AAACATTATT AGAAACAAGA
CCGAAACGTA TAAAACTTAA ATGGTCAACA TCACTCATCA AAGATCTTGA AACTATACGT
TTATTAAATT TTGATTGTGA TATTGCTATA GATGCAAATG AATCATTAAC AAAGCCATCA
TTTTTACAAT TAGCCAACGT AAATACATCA GATATTATAT ATATTGAAGA ACCTTTTAAA
ATTCTAGAAG ATTTAAATGA TATTGATATG TCTATTTTTC CTAGAATTGC CATCGATGAA
AAGGCACTTT CTATAGAAAA AATACAATCA ATAATTCAGC AATATCCCAT ACAAGTCGTC
GTGTTAAAAC CATTTAGACT TGGGGGAATA GATAGAATGT TAAACGCCAT GAAAATTTTG
AAAGAAAAAA ATATAAGGTT TGTAGTTGGG GGCATGTATG AGTTTGGTCT AAGTAGATAT
TTTACAGCAA TGTTAGCTAA AGAAGGAAGT TATCCGGGTG ATATTACGCC ACACGGTTAT
TATTTTTCTA ACGATATCGT AGAGACAAGT GGCATATTAA AAGGGGGAAT GATTTATTTC
ACTCCCCCTA AAGTCAAACG TTCTTTACTT AACAAAGTTT AA
 
Protein sequence
MKVKAINLYT YKEPFKSPIS TPKVKLTHRE SLFTEIVTYS GETYYGECNA FLTNWYDKET 
ILTVVNRLRQ WIPQVLHKDM TSFDSWLPYL NQMNDAPAAR SMVVMAVYQM YNDLHDFEVQ
YGATVSGLTN SQIETLLETR PKRIKLKWST SLIKDLETIR LLNFDCDIAI DANESLTKPS
FLQLANVNTS DIIYIEEPFK ILEDLNDIDM SIFPRIAIDE KALSIEKIQS IIQQYPIQVV
VLKPFRLGGI DRMLNAMKIL KEKNIRFVVG GMYEFGLSRY FTAMLAKEGS YPGDITPHGY
YFSNDIVETS GILKGGMIYF TPPKVKRSLL NKV