Gene SERP1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1293 
SymboltyrS 
ID3241436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1338682 
End bp1339947 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content33% 
IMG OID637167942 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_188865 
Protein GI57867255 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATG CTTTAATAGA AGATTTAAAA TGGAGAGGGT TAATTTATCA ACAAACAGAT 
GAAGAGGGTA TCGAAGAATT ATTAAATAAG GAACAGGTCA CTTTATATTG CGGCGCAGAT
CCTACAGCTG ATAGTTTACA TATTGGTCAC TTGTTACCTT TTTTAACATT AAGACGCTTC
CAAGAACATG GGCATCGTCC TATCGTCTTA ATTGGTGGAG GTACTGGTAT GATAGGAGAT
CCTTCTGGAA AGTCTGAAGA GCGCGTGTTA CAAACAGAAT CACAAGTTGA AGCTAACGTC
AAAGGCCTGT CTAATCAAAT GCATCGATTA TTTGAATTTG GCAGTGATAA AGGGGCAAAA
TTAGTTAATA ATAAAGATTG GCTTGGTCAA ATTTCGTTGA TTAGTTTTCT TAGAGATTAT
GGTAAACATG TTGGCGTTAA CTATATGCTA GGAAAAGATT CTATTCAAAC ACGTTTAGAA
CATGGTATCT CTTATACAGA ATTTACTTAT ACTATTTTAC AAGCTATTGA TTTTGGCTAT
TTAAATCGTG AGTTAAATTG TAAAATTCAA GTAGGCGGAT CTGATCAATG GGGTAATATT
ACAAGTGGTA TTGAATTAAT GCGACGAATG TATGGACAAA CTGAGGCATA TGGCCTAACA
ATCCCATTAG TAACTAAATC AGATGGGAAG AAATTTGGTA AATCAGAGTC TGGAGCTGTG
TGGTTAGATC CTGAAAAGAC AAGTCCATAT GAATTTTATC AATTTTGGAT TAATCAATCT
GACGAAGATG TAATTAAATT CTTAAAATAT TTTACTTTTT TAGAAAAAGA AGAAATTAAT
CGATTAGAAC AATCAAAAAA TGAAGCGCCT CACTTACGTG AAGCACAGAA AGCACTAGCG
GAAAATGTTA CGAAATTTAT TCATGGTGAA GCAGCTTTAA AAGACGCTAT ACGTATTTCA
AAAGCACTGT TTAGTGGAGA TTTAAAATCA TTATCTGCTA AAGAACTTAA AGAAGGGTTT
AAAGACGTAC CTCAAGTAAC GCTATCTACA AAAACGACAA ATATAGTTGA AGCACTTATT
GAAACAGGTA TTGCTTCATC TAAACGCCAA GCACGTGAAG ATGTAAACAA CGGTGCAATA
TATATTAATG GTGAACGTCA ACAATCAGTC GATTATGAGT TAAGTAGTAA AGACCTTATT
GAAGATGAAA TTACAATAAT TCGACGAGGA AAGAAAAAAT ATTTCATGGT TAATTACCAA
TCATAA
 
Protein sequence
MANALIEDLK WRGLIYQQTD EEGIEELLNK EQVTLYCGAD PTADSLHIGH LLPFLTLRRF 
QEHGHRPIVL IGGGTGMIGD PSGKSEERVL QTESQVEANV KGLSNQMHRL FEFGSDKGAK
LVNNKDWLGQ ISLISFLRDY GKHVGVNYML GKDSIQTRLE HGISYTEFTY TILQAIDFGY
LNRELNCKIQ VGGSDQWGNI TSGIELMRRM YGQTEAYGLT IPLVTKSDGK KFGKSESGAV
WLDPEKTSPY EFYQFWINQS DEDVIKFLKY FTFLEKEEIN RLEQSKNEAP HLREAQKALA
ENVTKFIHGE AALKDAIRIS KALFSGDLKS LSAKELKEGF KDVPQVTLST KTTNIVEALI
ETGIASSKRQ AREDVNNGAI YINGERQQSV DYELSSKDLI EDEITIIRRG KKKYFMVNYQ
S