| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1253 |
|---|
| Symbol | fpg |
|---|
| ID | 3242921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1289659 |
|---|
| End bp | 1290531 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637167903 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_188826 |
|---|
| Protein GI | 57867171 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.819814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAC TACCTGAAGT TGAACATGTT AAAAGAGGTA TTGAGCCATT TATAAAAAGT
GCAAAAATAG AGAAAGTAAC TTTTGCTAAA AATGTAATTA ACGGTAAGAA TAATAACCGT
GAGACGATTA TAAAAGGTAT GGAATTAGAT ACTTTTAAAA AACTTACTGA AGGTTATGTT
ATAAAAAAAG TTGAAAGAAG AAGTAAGTAC ATTATTTTTT ATATAGCGGA TCATGACGAT
GATAGAATCT TAGTTAGTCA TTTAGGTATG GCAGGCGGAT TCTTTGTTGT TAATAACCTT
GATGAGATAA GTACACCGAA TTATCGAAAG CATTGGCAAG TCATTTTCGA TTTGGATAAT
AAACAAAAAT TAGTCTATTC TGATATCAGA CGGTTTGGAG AAATTAGAAA TATAGTCAAT
TTTGATAGTT ATCCATCTTT ATTAGAAATC GCTCCAGAAC CATTTGAAGA GGTGGCATTT
GAACACTATT TAGAATGTTT GACAATGAAA AAATATAAGA ATAAACCAAT AAAACAAACG
ATTCTTGATC ATCGTGTTAT AGCAGGAGCT GGAAATATCT ATGCCTGTGA AGCTTTATTC
AGAGCTGGTA TTACTCCGGA TAAAATTACT AATTCACTCA CTAAACAAGA AAGAAAATCC
CTCTTTTATT ATGTTCGAGA AGTTTTAGAA GAGGGTATAA AATATGGAGG TACTAGTATT
TCAGATTATA GGCATGCAGA TGGTAAAACT GGACAAATGC AATTACATTT AAATGTATAT
AAACAAAAAA AGTGCAAGGT TTGTGGTCAT TCGATTGAAA CAAAAGTGAT AGCTGGTAGA
AATAGTCATT TTTGCCCAAA CTGTCAGAGA TAA
|
|---|
| Protein sequence | MPELPEVEHV KRGIEPFIKS AKIEKVTFAK NVINGKNNNR ETIIKGMELD TFKKLTEGYV
IKKVERRSKY IIFYIADHDD DRILVSHLGM AGGFFVVNNL DEISTPNYRK HWQVIFDLDN
KQKLVYSDIR RFGEIRNIVN FDSYPSLLEI APEPFEEVAF EHYLECLTMK KYKNKPIKQT
ILDHRVIAGA GNIYACEALF RAGITPDKIT NSLTKQERKS LFYYVREVLE EGIKYGGTSI
SDYRHADGKT GQMQLHLNVY KQKKCKVCGH SIETKVIAGR NSHFCPNCQR
|
|---|
| |