| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1245 |
|---|
| Symbol | |
|---|
| ID | 3241113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1279661 |
|---|
| End bp | 1281163 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637167896 |
|---|
| Product | amino acid permease family protein |
|---|
| Protein accession | YP_188819 |
|---|
| Protein GI | 57867164 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0833] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000163371 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ATAATAAACA AAATGACGGT GTTCAAAGAG GATTAAAAGA TAGACATATT
TCAATGATTG CCATTGGGGG ATGTATAGGA ACTGGTCTAT TCATGACTTC TGGTGGAGCT
ATACATGACG CAGGTGCATT GGGTGCTTTG ATTGCCTATG CAGTTATTGG AGCGATGGTG
TTCTTTCTAA TGACGTCGTT AGGGGAGATG GCGACATATT TGCCTGTGTC AGGTTCATTT
AGTACTTATG CTACACGCTT TGTCGATCCT TCACTAGGTT TTGCTTTAGG ATGGAATTAT
TGGTTCAACT GGGTGATAAC AGTAGCAGCT GATGTTACTA TTGCAGCGCA AGTTATACAA
TATTGGTCCC CTATGCAAGG TATACCAGCT TGGGTCTGGA GTTGTATTTT CCTTATTATT
ATTTTCGCGC TTAATTCTTT ATCCGTTAGA GTATATGGAG AGAGTGAATA TTGGTTCGCA
CTTATCAAAG TAGTTACAGT CATCATATTT ATAGGAATTG GTATCTTAAC TATTTTAGGG
ATTATGGGTG GAGAATTTGT AGGATTTGAT ACGTTTACAA AAGGAGATGG GCCAATACTA
GGTGGGAATT TAGGAGGTAG CTTGCTATCA ATTCTTGGTG TATTTCTAGT CGCAGGCTTC
TCATTCCAAG GAACTGAACT TATTGGTATT ACAGCAGGTG AATCTGAAAA TCCAGAAAGA
GCAGTTCCAA AAGCGATTAA ACAAGTATTT TGGCGTATAC TTTTATTTTA CATTCTAGCT
ATTTTCATTA TTGGTATGTT GATTCCATAT GATAGTAAGG CATTAATGGG CGGTGGTGAT
AGTATAGCTA CTTCACCTTT TACATTAGTA TTTAAGAATG CTGGATTAGC TTTTGCTGCT
TCATTTATGA ATGCTGTTAT ATTAACAAGT GTATTATCAG CAGGTAACTC AGGAATGTAT
GCTTCAACAA GAATGTTATA TTCGATGAGT AAAGATAAAT TAGCTTATAA TTCTTTTGGA
AAAACAAATA AAAGTGGCGT ACCTTATGTA TCTCTAATTG CAACTGGAGT ACTAGTCATT
CTTATTTTCG CATTGCAACA TTTAAGTGGA GATGCATATG AATACATTGT AGCTGCTAGC
GGAATGACTG GTTTTATTGC TTGGGTTGGT ATAGCAATCA GTCACTTTAG ATTTAGACGC
GCATTTGATA AACAAAATTA TGATAAATCA AAATTAAAAT ATAAAGCGAA GTTATTCCCA
TTTGGTCCGA TTTTTGCAGG TATTTTATGT GTAATAGTTA TCATTGGACA AGATGTAGAT
TTTATTAAAA CAGGTAACTT TGATATGAAT AGATTTTTTA TAACTTACAT GGGAATACCT
GTATTCTTAA TTTTCTTCTT TTATCATAAA TTTAGATATA AAACTAAAAA GATTCCTCTA
AACAAAGTTG ACTTAAGGCA AGATGTTTCG ATGGAAGAAG TAAGACACCA TAAAAATAAT
TAA
|
|---|
| Protein sequence | MKKNNKQNDG VQRGLKDRHI SMIAIGGCIG TGLFMTSGGA IHDAGALGAL IAYAVIGAMV
FFLMTSLGEM ATYLPVSGSF STYATRFVDP SLGFALGWNY WFNWVITVAA DVTIAAQVIQ
YWSPMQGIPA WVWSCIFLII IFALNSLSVR VYGESEYWFA LIKVVTVIIF IGIGILTILG
IMGGEFVGFD TFTKGDGPIL GGNLGGSLLS ILGVFLVAGF SFQGTELIGI TAGESENPER
AVPKAIKQVF WRILLFYILA IFIIGMLIPY DSKALMGGGD SIATSPFTLV FKNAGLAFAA
SFMNAVILTS VLSAGNSGMY ASTRMLYSMS KDKLAYNSFG KTNKSGVPYV SLIATGVLVI
LIFALQHLSG DAYEYIVAAS GMTGFIAWVG IAISHFRFRR AFDKQNYDKS KLKYKAKLFP
FGPIFAGILC VIVIIGQDVD FIKTGNFDMN RFFITYMGIP VFLIFFFYHK FRYKTKKIPL
NKVDLRQDVS MEEVRHHKNN
|
|---|
| |