| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1072 |
|---|
| Symbol | |
|---|
| ID | 3242767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1117752 |
|---|
| End bp | 1118876 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637167726 |
|---|
| Product | peptidase T-like protein |
|---|
| Protein accession | YP_188649 |
|---|
| Protein GI | 57866992 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2195] Di- and tripeptidases |
|---|
| TIGRFAM ID | [TIGR01883] peptidase T-like protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.945662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATC AAAAACGTTT ATTAGATTGT TTTCTAGAAT TAGTGCAAAT TGATTCGGAA
ACAGGGCACG AAGAAACAAT TCAACCTTAT CTTAAAGATA CGTTTGAAAA AATGGGGCTC
CATGTTATTG AAGATGAAGC TTCAAAAAAT AATAGATTAG GTGCTAACAA TCTTATTTGT
ACGTTAAAAA GTAATATAAG TCATCAGAAT GTGCCGAAAA TTTATTTTAC AAGCCACATG
GATACTGTCG TTCCAGGAAA AAACATCCAA CCTGTAGTAA AAGAAGATGG ATACGTTTAT
AGCGATGGAA CTACGATACT CGGGGCGGAC GATAAAGCCG GTCTTGCGGC AATAATTGAA
GCGATTAAAC AAATTAAGGA ATCAAATTTG CCACACGGAC AGATTCAAAT AATTATTACC
GTGGGAGAGG AATCTGGATT AGTAGGTGCT AAAGCAATAG ATACTCGCCT TCTTGATGCA
GATTTCGGCT ATGCTGTAGA TGCAAGTAAA GATGTTGGAA CTACTGTTAT CGGTGCTCCA
ACTCAAGTAA AGATTTATAC AACTATAAAA GGGAAAACCG CCCATGCAAG CACACCTAAA
AAAGGTATTA GCGCAATAAA TATTGCATCA AAAGCAATCA GTCGAATGAA ATTGGGACAA
GTCGATGCAT TAACAACAGC CAATATAGGT AAATTTCACG GAGGTTGTGC CACTAATATT
ATAGCTGATG AAGTCACTTT AGAGGCAGAA GCACGGTCAC ATGATGATCA AAGCATTAAT
AAACAAGTGA AACATATGAA AGAGACTTTC GAAACGACAG CAAATGAATT AGGCGGTCAA
GCTGAAGTGT TAGTTGAAAA AAGTTATCCG GGATTTGAAG TTAGTGAAGC TGACAAAGTA
ACACAATATG CTATATCTAG TGCATTAGCC CTCGGTCTAA AAGGTGATAC TTGTATTGCT
GGTGGTGGTT CAGACGGCAA CATCATGAAT CAATATGGCA TTCCTTCTGT GATTTTAGGA
GTAGGATATG AAAACATACA TACTACTTCG GAAAGAATAG CAATAAAGGA TATGTATATG
CTCACAAGAC AAATAATAAA AATTATTGAG CTAGTAGCTG AATAA
|
|---|
| Protein sequence | MINQKRLLDC FLELVQIDSE TGHEETIQPY LKDTFEKMGL HVIEDEASKN NRLGANNLIC
TLKSNISHQN VPKIYFTSHM DTVVPGKNIQ PVVKEDGYVY SDGTTILGAD DKAGLAAIIE
AIKQIKESNL PHGQIQIIIT VGEESGLVGA KAIDTRLLDA DFGYAVDASK DVGTTVIGAP
TQVKIYTTIK GKTAHASTPK KGISAINIAS KAISRMKLGQ VDALTTANIG KFHGGCATNI
IADEVTLEAE ARSHDDQSIN KQVKHMKETF ETTANELGGQ AEVLVEKSYP GFEVSEADKV
TQYAISSALA LGLKGDTCIA GGGSDGNIMN QYGIPSVILG VGYENIHTTS ERIAIKDMYM
LTRQIIKIIE LVAE
|
|---|
| |