Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0984 |
Symbol | |
ID | 3242077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1000232 |
End bp | 1001062 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 637167639 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_188562 |
Protein GI | 57866885 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.101875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACTTA GTGCTATTGA AGGAGTTCAC ATTACAAAAC AATTTAATAA GCAAAACATA CTTAATGATT TAAATTTTAG AGTACCGAAA CATTCAATAA CGTTAGTAAA TGGTAAAAAT GGTTCAGGTA AAAGTATAAC TTTAAAAATT ATTGCTGGTT TAATTACTCA ATTTGATGGA TCATTATTAA TAAATGGCAA AATTAGTTAT GCTGTAGATA TCTTTCCTAA TAATTTAAGT TTAACGATTA ACGAATATTT TGAATTTCTA TTAAAAGTTC ATTCTAATAA TCAAACTAAA GTCAAACTTA ATTACCTTAT AAATCATCTT AAATTATCGT CATTTTTGAA CCAAAAATTA AAAGACTGTT CAAAAGGTAC AAAGCAGAAA GTCAATGTTA TTCAATGTTT AATTAAAAAC GCTGACATAT ATATTTTAGA TGAACCATTT TCTGGATTAG ATCAGAATGC TACAAAATTT CTGATAAATT ATCTAGAGTG GTTAAAATTA TCATCAACAA TTATTTTAAC ATCTCATGAA TTGAATCAAC TTATAAATAT TACTACGCAT ATCTTAAATA TTGAAACAGG TATTTTTTAT ATTAACGATA TAAATAAAAA TCATTTAGTA GTTACTTCAA AACTAATTGT AGTTAAAAAT GATTCTGTTA CAATTAACTT ACTAAAAGAA ATACAAAATC AAAAAATTAC ATATACTGAC AATAACAAAA TATCCATCCA AACTAATCAA AACGATTTGA ATTTAGTACT GAAACAATTA ATCGTGCATA ACTGTGAAAT TCTTGAGATT AAGGATGTGA AAAACTTTTG A
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Protein sequence | MSLSAIEGVH ITKQFNKQNI LNDLNFRVPK HSITLVNGKN GSGKSITLKI IAGLITQFDG SLLINGKISY AVDIFPNNLS LTINEYFEFL LKVHSNNQTK VKLNYLINHL KLSSFLNQKL KDCSKGTKQK VNVIQCLIKN ADIYILDEPF SGLDQNATKF LINYLEWLKL SSTIILTSHE LNQLINITTH ILNIETGIFY INDINKNHLV VTSKLIVVKN DSVTINLLKE IQNQKITYTD NNKISIQTNQ NDLNLVLKQL IVHNCEILEI KDVKNF
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