| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0977 |
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| Symbol | brnQ-1 |
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| ID | 3242062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 993591 |
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| End bp | 994934 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637167632 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_188555 |
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| Protein GI | 57866871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.380411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAA ATACGTGGAT TATAGGCTTT ACTTTATTCG CTATGTTTTT TGGCGCAGGT
AACCTTATAT TTCCAACACA ACTTGGACTC GAAAGTGGTC ATTTCTTTTG GCCAGCCATA
CTAGCCTTTG CACTTACGGG TATTGGATTA CCGCTTCTTG GCGTTGTGGT AGGCGCGCTT
GATAAACATG GTTATATTGG GTCTTTTAAT AAAATATCAC CACGATTTTC ATTAATATTT
TTGATTATCA TCTATCTCAC TATAGGACCA TTATTTGCGA TACCACGTAC AGCTTCAACT
TCATTTGAAA TGACTGTTAC TCCTATTGCA CATAATAGTG GGAATTTAGC ATTATTTATT
TTTACAGTAA TCTATTTTTT AATCGTTCTT TATTTATGCT TGAATCCTAA TAAGATGATA
GATCGTATTG GTTCATTACT TACACCTTTA TTACTTATTA CCATTGTCGC TATGATCATT
AAAGGTTTTG TAGATTTTGG TGGACATTCT TCAAATTACG GCATGACAAA TGCTTATCAT
TCCAATTTAA GTGGATTTTC ACAAGGATTT ACACAAGGTT ACCTTACAAT GGATGCTATT
GCTTCTATTG CATTTTCGAT GATAGTTGTT AATGCGATTA AAACAACAGG AATACAGCAT
GCTGATAAAA TCTTTAAACA AACCATTATT GCGGGTCTCA TAGCTGCAAT CGCATTAGTA
TTTATATATA TTTCGCTAGG GTACATAGGC AATCATATCA ATATTCCGTC AGATACTCTA
AAGGAATTGA AAGCTAAAGA TCAAAATATA GGTACGTATT TACTCACAAC AATGGCAACG
AAGGGCTTTG GTACTTTCGG AAAATACTTA CTTGGTATTA TCGTATCATT AGCATGTTTA
ACTACTGCTT GTGGATTAAT CGTATCAGTA AGTGAATATT TCCACAGAAT AATACCTAAG
ATACCTTATA AAGTATTTGT GGTGTTTTTC ATTTTAGTTA GTTTCATTTT AGCTAATCAA
GGACTTAATT CCGTAATTAA AATGTCAGTC CCTGTACTTA GTGTAATCTA TCCTGTGGCT
ATTACAGTTA TTTTGTTAAT ACTCATTGCT CGCTTCATAC CTACAAAACG TATTGCACAA
CAAATACCGT TAATTATTGT AGCAATTGAA TCAATCTTAA GCTTAATAAC GACACAAGGG
TGGATACGTA TTTCATTAAT AGATAGTTTA CCTTTAAAAG AATATTCACT TGAATGGTTC
CCAATTGCTG TTGTAGCAAC TCTTGTTGGT TACATGATTA GTTATTTTGT TAAACAATCT
AACATTGTAT ATCAAAAAGA ATAA
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| Protein sequence | MNKNTWIIGF TLFAMFFGAG NLIFPTQLGL ESGHFFWPAI LAFALTGIGL PLLGVVVGAL
DKHGYIGSFN KISPRFSLIF LIIIYLTIGP LFAIPRTAST SFEMTVTPIA HNSGNLALFI
FTVIYFLIVL YLCLNPNKMI DRIGSLLTPL LLITIVAMII KGFVDFGGHS SNYGMTNAYH
SNLSGFSQGF TQGYLTMDAI ASIAFSMIVV NAIKTTGIQH ADKIFKQTII AGLIAAIALV
FIYISLGYIG NHINIPSDTL KELKAKDQNI GTYLLTTMAT KGFGTFGKYL LGIIVSLACL
TTACGLIVSV SEYFHRIIPK IPYKVFVVFF ILVSFILANQ GLNSVIKMSV PVLSVIYPVA
ITVILLILIA RFIPTKRIAQ QIPLIIVAIE SILSLITTQG WIRISLIDSL PLKEYSLEWF
PIAVVATLVG YMISYFVKQS NIVYQKE
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