| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0940 |
|---|
| Symbol | trpC |
|---|
| ID | 3242083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 957055 |
|---|
| End bp | 957843 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637167595 |
|---|
| Product | indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_188518 |
|---|
| Protein GI | 57866891 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTT TAAATGAAAT TATTGAGTAT AAAAAAACTT TGCTTGAGCG TAAATACTAT
GATAAAAAAC TTGAAATTTT ACAAGATAAC GGAAATGTTA AGAGGAGAAA GCTGATTGAT
TCACTTAACT ATGATAGAAC ATTATCAGTT ATTGCTGAAA TAAAATCGAA AAGCCCATCT
GTACCTCAAT TACCGCAACG TGATCTTGTT CAACAAGTTA AAGATTATCA AAAATATGGT
GCTAATGCTA TTTCAATATT AACTGATGAA AAATACTTTG GCGGTAGTTT TGAACGATTA
AATCAGTTAT CAAAGATAAC ATCGTTACCA GTTTTATGTA AAGATTTTAT TATTGATAAA
ATTCAAATAG ATGTTGCAAA ACGAGCTGGT GCATCTATTA TTTTATTAAT AGTAAATATT
TTAAGTGATG ACCAATTAAA AGAATTGTAT TCATATGCAA CAAACCATAA TTTAGAAGCT
CTAGTAGAAG TTCATACAAT TAGAGAACTT GAACGTGCAC ACCAAATTAA CCCTAAAATT
ATTGGTGTTA ATAATCGTGA TTTAAAACGA TTTGAAACCG ATGTTCTACA TACAAATAAA
TTACTTAAGT TTAAAAAGTC TAATTGCTGC TACATTTCAG AGAGTGGCAT TCATACAAAA
GAAGATGTTG AGAAAATAGT AGATTCAAGT ATTGACGGTT TACTTGTAGG GGAGGCATTA
ATGAAAACAA ATGACTTAAG TCAGTTTTTG CCTAGTTTAA AGTTAAAGAA GAATCTCTAT
GATAGTTAA
|
|---|
| Protein sequence | MTILNEIIEY KKTLLERKYY DKKLEILQDN GNVKRRKLID SLNYDRTLSV IAEIKSKSPS
VPQLPQRDLV QQVKDYQKYG ANAISILTDE KYFGGSFERL NQLSKITSLP VLCKDFIIDK
IQIDVAKRAG ASIILLIVNI LSDDQLKELY SYATNHNLEA LVEVHTIREL ERAHQINPKI
IGVNNRDLKR FETDVLHTNK LLKFKKSNCC YISESGIHTK EDVEKIVDSS IDGLLVGEAL
MKTNDLSQFL PSLKLKKNLY DS
|
|---|
| |