Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0830 |
Symbol | proS |
ID | 3240996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 834049 |
End bp | 835752 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167489 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_188412 |
Protein GI | 57866745 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0265646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAT CTAAAGTATT TATACCAACG ATGAGAGAAG TCCCTGCAGA GGCGGAAGCA TTAAGCCATC GTTTATTATT AAAAGCAGGG TTAATTAAAC AGAGTACAAG TGGTATATAT AGTTACTTAC CACTTGCTAC ACGTGTACTA AATAATATAT CTAAAATCAT ACGTGAAGAA ATGGAAAGTA TAGATGCTGT AGAAATTCTT ATGCCAGCTT TACAACAAGC AGAATTATGG GAAGAGTCAG GACGTTGGAG TGCATATGGT CCAGAACTAA TGCGTTTAAA AGACAGAAAC GGACGTGAAT TTGCATTAGG ACCTACTCAT GAGGAAGTAG TCACTTCTTT AGTAAGAGAT GAATTAAAAT CATATAAACA GTTACCCCTT ACTTTATTTC AAATTCAATC CAAATATAGA GATGAGAAAA GACCACGCTT TGGATTATTA AGAGGACGCG AATTTCTTAT GAAAGATGCA TATTCCTTCC ATTCAGATGA AGCTTCATTA GATGCAACTT ATCAAGATAT GTATCAAGCA TATAGTCGCA TATTCAAACG TGTAGGCATC AATGCAAGAC CGGTTGTGGC AGATTCAGGT GCAATAGGGG GAAGTCATAC ACACGAGTTT ATGGCATTGA GTGAAATTGG GGAAGATACA ATAGTTTATA GTAATGAGAG TGACTATGCA GCGAATATTG AAAAGGCTGA AGTTGTTTAT CATCCTTCTC ATAAGCATTC TGCACTTGCG GAATTGACTA AAGTTGAGAC GCCCAATGTT AAAACAGCTC AAGAAGTTGC AGAATATTTA AAGAGACCAT TAGATGAAAT TGTAAAAACT ATGATCTTTA AAATAGATGG CGAATTTATT ATGTTTCTAG TTCGTGGACA TCATGAATTA AATGAAGTGA AATTAAAATC ATATTTCGGC ACGGAACATG TTGAAATGGC TACTCCAGAT GAAATTGTTA ATCTTGTAGA TGCCAATCCG GGGTCTCTTG GTCCTATTTT TGATAAAGAT ATTAAAATTT ATGCCGATAA TTACTTACAA GATTTAAATA ACTTTGTTGT AGGAGCTAAT GAAGATCATT ATCACTATAT AAATGTCAAT ATTGGTAGAG ACTTTGATGT AACAGAATAC GGTGACTTTA GATTCATTAC ACAAGGTGAG ATGTTAAGTG ATGGCTCGGG AGTAGCACAA TTTGCTGAAG GCATTGAAGT AGGACAAGTT TTCAAATTAG GGACAAAATA TTCTGAATCA ATGAATGCAA CTTTTCTAGA TAATCAGGGA AAAGCTCAAC CACTCATTAT GGGCTGTTAT GGTATTGGAG TATCAAGAAC ATTAAGTGCA ATTGTTGAAC AAAACAATGA CGAGAATGGA ATTATTTGGC CAAAATCAGT AACGCCTTTC GATATCCATC TAATTACTAT CAATCCTAAA AAGGATGATC AACGTACTTT AGGTGATCAA CTTTATCAAA AATTAATGGA TTCATACGAT GTTTTATATG ATGACCGAAA AGAACGTGCT GGTGTTAAAT TTAATGATTC AGACCTAATT GGGTTACCGG TACGAGTTGT TGTTGGTAAA AGAGCTGAAG AAGGTATTGT TGAGGTAAAA CAACGCATTA ACGGTTTAAG TGAAGAAGTG CAAATTGATG AATTAGAGTA TTACTTACAA GAATTATTTA AGAATATTAA GTAA
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Protein sequence | MKQSKVFIPT MREVPAEAEA LSHRLLLKAG LIKQSTSGIY SYLPLATRVL NNISKIIREE MESIDAVEIL MPALQQAELW EESGRWSAYG PELMRLKDRN GREFALGPTH EEVVTSLVRD ELKSYKQLPL TLFQIQSKYR DEKRPRFGLL RGREFLMKDA YSFHSDEASL DATYQDMYQA YSRIFKRVGI NARPVVADSG AIGGSHTHEF MALSEIGEDT IVYSNESDYA ANIEKAEVVY HPSHKHSALA ELTKVETPNV KTAQEVAEYL KRPLDEIVKT MIFKIDGEFI MFLVRGHHEL NEVKLKSYFG TEHVEMATPD EIVNLVDANP GSLGPIFDKD IKIYADNYLQ DLNNFVVGAN EDHYHYINVN IGRDFDVTEY GDFRFITQGE MLSDGSGVAQ FAEGIEVGQV FKLGTKYSES MNATFLDNQG KAQPLIMGCY GIGVSRTLSA IVEQNNDENG IIWPKSVTPF DIHLITINPK KDDQRTLGDQ LYQKLMDSYD VLYDDRKERA GVKFNDSDLI GLPVRVVVGK RAEEGIVEVK QRINGLSEEV QIDELEYYLQ ELFKNIK
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