Gene SERP0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0830 
SymbolproS 
ID3240996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp834049 
End bp835752 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content34% 
IMG OID637167489 
Productprolyl-tRNA synthetase 
Protein accessionYP_188412 
Protein GI57866745 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0442] Prolyl-tRNA synthetase 
TIGRFAM ID[TIGR00409] prolyl-tRNA synthetase, family II 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0265646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT CTAAAGTATT TATACCAACG ATGAGAGAAG TCCCTGCAGA GGCGGAAGCA 
TTAAGCCATC GTTTATTATT AAAAGCAGGG TTAATTAAAC AGAGTACAAG TGGTATATAT
AGTTACTTAC CACTTGCTAC ACGTGTACTA AATAATATAT CTAAAATCAT ACGTGAAGAA
ATGGAAAGTA TAGATGCTGT AGAAATTCTT ATGCCAGCTT TACAACAAGC AGAATTATGG
GAAGAGTCAG GACGTTGGAG TGCATATGGT CCAGAACTAA TGCGTTTAAA AGACAGAAAC
GGACGTGAAT TTGCATTAGG ACCTACTCAT GAGGAAGTAG TCACTTCTTT AGTAAGAGAT
GAATTAAAAT CATATAAACA GTTACCCCTT ACTTTATTTC AAATTCAATC CAAATATAGA
GATGAGAAAA GACCACGCTT TGGATTATTA AGAGGACGCG AATTTCTTAT GAAAGATGCA
TATTCCTTCC ATTCAGATGA AGCTTCATTA GATGCAACTT ATCAAGATAT GTATCAAGCA
TATAGTCGCA TATTCAAACG TGTAGGCATC AATGCAAGAC CGGTTGTGGC AGATTCAGGT
GCAATAGGGG GAAGTCATAC ACACGAGTTT ATGGCATTGA GTGAAATTGG GGAAGATACA
ATAGTTTATA GTAATGAGAG TGACTATGCA GCGAATATTG AAAAGGCTGA AGTTGTTTAT
CATCCTTCTC ATAAGCATTC TGCACTTGCG GAATTGACTA AAGTTGAGAC GCCCAATGTT
AAAACAGCTC AAGAAGTTGC AGAATATTTA AAGAGACCAT TAGATGAAAT TGTAAAAACT
ATGATCTTTA AAATAGATGG CGAATTTATT ATGTTTCTAG TTCGTGGACA TCATGAATTA
AATGAAGTGA AATTAAAATC ATATTTCGGC ACGGAACATG TTGAAATGGC TACTCCAGAT
GAAATTGTTA ATCTTGTAGA TGCCAATCCG GGGTCTCTTG GTCCTATTTT TGATAAAGAT
ATTAAAATTT ATGCCGATAA TTACTTACAA GATTTAAATA ACTTTGTTGT AGGAGCTAAT
GAAGATCATT ATCACTATAT AAATGTCAAT ATTGGTAGAG ACTTTGATGT AACAGAATAC
GGTGACTTTA GATTCATTAC ACAAGGTGAG ATGTTAAGTG ATGGCTCGGG AGTAGCACAA
TTTGCTGAAG GCATTGAAGT AGGACAAGTT TTCAAATTAG GGACAAAATA TTCTGAATCA
ATGAATGCAA CTTTTCTAGA TAATCAGGGA AAAGCTCAAC CACTCATTAT GGGCTGTTAT
GGTATTGGAG TATCAAGAAC ATTAAGTGCA ATTGTTGAAC AAAACAATGA CGAGAATGGA
ATTATTTGGC CAAAATCAGT AACGCCTTTC GATATCCATC TAATTACTAT CAATCCTAAA
AAGGATGATC AACGTACTTT AGGTGATCAA CTTTATCAAA AATTAATGGA TTCATACGAT
GTTTTATATG ATGACCGAAA AGAACGTGCT GGTGTTAAAT TTAATGATTC AGACCTAATT
GGGTTACCGG TACGAGTTGT TGTTGGTAAA AGAGCTGAAG AAGGTATTGT TGAGGTAAAA
CAACGCATTA ACGGTTTAAG TGAAGAAGTG CAAATTGATG AATTAGAGTA TTACTTACAA
GAATTATTTA AGAATATTAA GTAA
 
Protein sequence
MKQSKVFIPT MREVPAEAEA LSHRLLLKAG LIKQSTSGIY SYLPLATRVL NNISKIIREE 
MESIDAVEIL MPALQQAELW EESGRWSAYG PELMRLKDRN GREFALGPTH EEVVTSLVRD
ELKSYKQLPL TLFQIQSKYR DEKRPRFGLL RGREFLMKDA YSFHSDEASL DATYQDMYQA
YSRIFKRVGI NARPVVADSG AIGGSHTHEF MALSEIGEDT IVYSNESDYA ANIEKAEVVY
HPSHKHSALA ELTKVETPNV KTAQEVAEYL KRPLDEIVKT MIFKIDGEFI MFLVRGHHEL
NEVKLKSYFG TEHVEMATPD EIVNLVDANP GSLGPIFDKD IKIYADNYLQ DLNNFVVGAN
EDHYHYINVN IGRDFDVTEY GDFRFITQGE MLSDGSGVAQ FAEGIEVGQV FKLGTKYSES
MNATFLDNQG KAQPLIMGCY GIGVSRTLSA IVEQNNDENG IIWPKSVTPF DIHLITINPK
KDDQRTLGDQ LYQKLMDSYD VLYDDRKERA GVKFNDSDLI GLPVRVVVGK RAEEGIVEVK
QRINGLSEEV QIDELEYYLQ ELFKNIK