Gene SERP0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0756 
SymbolylmH 
ID3242824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand+ 
Start bp753923 
End bp754585 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content33% 
IMG OID637167416 
ProductylmH protein 
Protein accessionYP_188339 
Protein GI57866705 
COG category[S] Function unknown 
COG ID[COG2302] Uncharacterized conserved protein, contains S4-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.031626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACCCGC GAGGCCAATA TATACTTGAG GTCATTACGC GTAGTTATCA AGATTTACAT 
GTCACATTTT TTGGTGGACC ACATGCAGAA AGGAAACGTG CAATCATCGC ACCATTATAT 
TTTAAGCCAC AGCCTGAGGA CTTTGAACTG ACTTTATTTG AACTTCAATA TCCTAAGAAA 
TTTGTAACAA TACAACATCA GCACGTTCTT GGAACACTCA TGTCACTGGG AATACAAAGA 
GATCAACTCG GTGATATTAT AGTTGGAGAA GATATACAGT TTGTTTTGAC AAAACAATTA 
GAATCATATA TTATATCTGA ACTAACGCGT ATTAAGGGAG CCACAGTTAA ACTTAATTCT 
ATTCCTACTG AAGATATGAT ACAATCAGAA GAGAATTGGA AAGTTCATAG TACAACTGTG 
AGCGCTTTGA GATTAGATGT AGTTTTGAAA GAGATAATTC ATAAATCTCG AAATATTGCA 
CAACAATTAA TTATAAAAAA AAGAGTCAAA GTTAACCATA CTGTAATAGA TTCTACAGAT 
TTTCAATTAG AGCAGAATGA TTTATTGTCA ATTCAAGGTT ATGGTAGAGC TCAAATTGTT 
GAAATAGGTG GAAAAACGAA AAAGAACAAG TTACACATTC ATTATCAAAC ACTATTTAAA 
TAG
 
Protein sequence
MDPRGQYILE VITRSYQDLH VTFFGGPHAE RKRAIIAPLY FKPQPEDFEL TLFELQYPKK 
FVTIQHQHVL GTLMSLGIQR DQLGDIIVGE DIQFVLTKQL ESYIISELTR IKGATVKLNS 
IPTEDMIQSE ENWKVHSTTV SALRLDVVLK EIIHKSRNIA QQLIIKKRVK VNHTVIDSTD 
FQLEQNDLLS IQGYGRAQIV EIGGKTKKNK LHIHYQTLFK