| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0673 |
|---|
| Symbol | cydB |
|---|
| ID | 3241146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | + |
|---|
| Start bp | 668931 |
|---|
| End bp | 669947 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637167334 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_188258 |
|---|
| Protein GI | 57866592 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTACG CTTATATCGG TATAACAGTA TTATGGGTAT TTTTATTTTG TTATATTATT
ATCGCCTCCA TTGATTTTGG TGCAGGATTT TTCGCATTGC ATTCTAAAAT GACAGGTAAT
GAGAAAAAGG TTAATCATTT AATCCATAGA TACCTCAATC CAGTTTGGGA AGTTACAAAT
GTCTTTTTCG TTTTCTTTTT TGTAGGATTT ATAGGTTTTT TTCCTGATTC TGCTAAATAC
TTAGGAACAG TTTTATTAGT ACCCGGATCA ATAGCTTTAA TTCTTATTTC TATACGAAGT
AGTTTTTATG CTTTTGAAAA TTATGGTCAA GATACTAAAC TGCCCTGGAT TGTATTATAT
GGTTTAACAG GGCTGTTAAT TCCAGCTTCT CTAGCAACTG CTCTAACAAT TTCAGAAGGT
GGTTATATCT ATGAGCATGG CACACATATT GATTTAGACT GGATACAATT ATTATTAAGT
CCATTTGCAT GGTCTGTAGT ATTCTTAGCC ATTGTTTCAG TTCTTTATAT TTCATCAGGT
TTTTTAACAT ATTATGCTCA TAAAGCAAAT GATCAACCTG CTTATGATAT GACACGACAA
TGGCATATTT TTTGGGGGCC ACCTATGATT GTGATTTCAT TATTTGTTTT CTTATCTCTT
AGAATTCAAA ATTCTGATCA CTTTAGAACT GCTATTTTTA ATTATTGGAG GATGTTTGCA
ATCAGCTTTA TATTTTTTAT AATAGCTGGA TTACTGACTA TATTTAAAAA GAAACACGGT
CTAGCTTTTA TCATGGTTAT ATTGCAAATG TTATTTGCAT TCTTTGGCTA CGGAATGAGT
AAACTTCCAT ATTTACTTTA TCCGTTTATT AAAATTACAG ACTCCCATGT CAATCCGGAA
ATGGGATTAT CATTAGTTAT TGTTTTTGTT TTAGGTTTAC TTTTATTAAT TCCATCGTTA
ATATTATTAT TAAGATTATT TGTTTTCGAC AAAGCATATG TGGAAGGAAA GAAATAA
|
|---|
| Protein sequence | MIYAYIGITV LWVFLFCYII IASIDFGAGF FALHSKMTGN EKKVNHLIHR YLNPVWEVTN
VFFVFFFVGF IGFFPDSAKY LGTVLLVPGS IALILISIRS SFYAFENYGQ DTKLPWIVLY
GLTGLLIPAS LATALTISEG GYIYEHGTHI DLDWIQLLLS PFAWSVVFLA IVSVLYISSG
FLTYYAHKAN DQPAYDMTRQ WHIFWGPPMI VISLFVFLSL RIQNSDHFRT AIFNYWRMFA
ISFIFFIIAG LLTIFKKKHG LAFIMVILQM LFAFFGYGMS KLPYLLYPFI KITDSHVNPE
MGLSLVIVFV LGLLLLIPSL ILLLRLFVFD KAYVEGKK
|
|---|
| |