Gene SERP0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0605 
Symbol 
ID3241139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp597258 
End bp598451 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content34% 
IMG OID637167266 
Producthypothetical protein 
Protein accessionYP_188192 
Protein GI57866585 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.184061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATT CTTCGTCAAG TAATTACTCA AGTAACAGAA ACTTTGTTAT GATGTTGGTA 
ATTCTGTTTC TGATGGAATT TGCAAGAGGT ATGTACATAC TAAGTTATAT AAACTTTTTA
CCTACAGTGA CCTCTATCGC AATAGCAATC ACATCATTTG CTTTTTCCAT TCACTTTATC
GCAGATGCTG CAACAAATTT TGTCATCGGC TTTTTACTTA AAAAATTTGG TTCAAAATTA
GTACTTACAT CTGGATTCTT ACTTGCTTTT ATAAGCTTGT TTTTAGTGAT ATGGTTCCCG
GCATCACCAT TCATAATTAT TTTCAGTGCT ATTATGTTAG GAATTGCTGT GAGTCCGATT
TGGGTTATCA TGTTATCTAG TGTAGATGAA AGAAATCGCG GCAAACAAAT GGGTTATGTC
TACTTTTCAT GGTTGCTAGG TTTATTGGTG GGTATGGTTA TCATGAACTT GCTTATTAAA
TTCCATCCTA CTCGTTTTGC ATTTTTAATG GCCTTGGTTG TGCTTATTGC CTGGGTACTA
TACTATTTTG TTAATATCAA CTTAACAAAT TACAATACTA AACCTGTGAA AGCACAATTA
AAGCAAATTG TAGATGTTAC ACAACGTCAT CTTATTCTAT TTCCGGGTAT CTTGTTACAA
GGAGCAGCTA TAGCAGCACT TGTACCTATT CTTCCAAAAT ATGCAACGCA AGTTGTGAAA
GTATCAACCG TTGAATATAC AGTAGCAATC ATTATTGGTG GCATAGGCTG TGCTTTCTCT
ATGTTATTTT TATCAAAAAT CATCGACAAT AATAGCAAAG GGTTTATGTA TGGAGTTATT
TTTAGTGGCT TTATACTATA TACAATTCTT ATATTCGGGC TATCTACAAT TACAAATATA
TATATAGTTT GGGCCATAGG ACTTTTTATT GGGCTAATGT ACGGTATCCT CTTACCGGCT
TGGAATACCT TTATGGCTGG GCATATTAAT CCTAACGAAC AGGAAGAAAC ATGGGGCGTG
TTCAACAGTG TTCAAGGCTT CGGTTCAATG ATAGGCCCAC TAGTCGGAGG TCTAATTACT
CAATTTACTA ATAATTTAAA TAATACCTTT TACTTTTCAG CGATGATTTT TCTTGCACTT
GCAGTATTTT ACGGATATTA CTTTATTAAA ACAAACAGAA GGGTTAAACC TTAA
 
Protein sequence
MQDSSSSNYS SNRNFVMMLV ILFLMEFARG MYILSYINFL PTVTSIAIAI TSFAFSIHFI 
ADAATNFVIG FLLKKFGSKL VLTSGFLLAF ISLFLVIWFP ASPFIIIFSA IMLGIAVSPI
WVIMLSSVDE RNRGKQMGYV YFSWLLGLLV GMVIMNLLIK FHPTRFAFLM ALVVLIAWVL
YYFVNINLTN YNTKPVKAQL KQIVDVTQRH LILFPGILLQ GAAIAALVPI LPKYATQVVK
VSTVEYTVAI IIGGIGCAFS MLFLSKIIDN NSKGFMYGVI FSGFILYTIL IFGLSTITNI
YIVWAIGLFI GLMYGILLPA WNTFMAGHIN PNEQEETWGV FNSVQGFGSM IGPLVGGLIT
QFTNNLNNTF YFSAMIFLAL AVFYGYYFIK TNRRVKP