Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0605 |
Symbol | |
ID | 3241139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 597258 |
End bp | 598451 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167266 |
Product | hypothetical protein |
Protein accession | YP_188192 |
Protein GI | 57866585 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.184061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGATT CTTCGTCAAG TAATTACTCA AGTAACAGAA ACTTTGTTAT GATGTTGGTA ATTCTGTTTC TGATGGAATT TGCAAGAGGT ATGTACATAC TAAGTTATAT AAACTTTTTA CCTACAGTGA CCTCTATCGC AATAGCAATC ACATCATTTG CTTTTTCCAT TCACTTTATC GCAGATGCTG CAACAAATTT TGTCATCGGC TTTTTACTTA AAAAATTTGG TTCAAAATTA GTACTTACAT CTGGATTCTT ACTTGCTTTT ATAAGCTTGT TTTTAGTGAT ATGGTTCCCG GCATCACCAT TCATAATTAT TTTCAGTGCT ATTATGTTAG GAATTGCTGT GAGTCCGATT TGGGTTATCA TGTTATCTAG TGTAGATGAA AGAAATCGCG GCAAACAAAT GGGTTATGTC TACTTTTCAT GGTTGCTAGG TTTATTGGTG GGTATGGTTA TCATGAACTT GCTTATTAAA TTCCATCCTA CTCGTTTTGC ATTTTTAATG GCCTTGGTTG TGCTTATTGC CTGGGTACTA TACTATTTTG TTAATATCAA CTTAACAAAT TACAATACTA AACCTGTGAA AGCACAATTA AAGCAAATTG TAGATGTTAC ACAACGTCAT CTTATTCTAT TTCCGGGTAT CTTGTTACAA GGAGCAGCTA TAGCAGCACT TGTACCTATT CTTCCAAAAT ATGCAACGCA AGTTGTGAAA GTATCAACCG TTGAATATAC AGTAGCAATC ATTATTGGTG GCATAGGCTG TGCTTTCTCT ATGTTATTTT TATCAAAAAT CATCGACAAT AATAGCAAAG GGTTTATGTA TGGAGTTATT TTTAGTGGCT TTATACTATA TACAATTCTT ATATTCGGGC TATCTACAAT TACAAATATA TATATAGTTT GGGCCATAGG ACTTTTTATT GGGCTAATGT ACGGTATCCT CTTACCGGCT TGGAATACCT TTATGGCTGG GCATATTAAT CCTAACGAAC AGGAAGAAAC ATGGGGCGTG TTCAACAGTG TTCAAGGCTT CGGTTCAATG ATAGGCCCAC TAGTCGGAGG TCTAATTACT CAATTTACTA ATAATTTAAA TAATACCTTT TACTTTTCAG CGATGATTTT TCTTGCACTT GCAGTATTTT ACGGATATTA CTTTATTAAA ACAAACAGAA GGGTTAAACC TTAA
|
Protein sequence | MQDSSSSNYS SNRNFVMMLV ILFLMEFARG MYILSYINFL PTVTSIAIAI TSFAFSIHFI ADAATNFVIG FLLKKFGSKL VLTSGFLLAF ISLFLVIWFP ASPFIIIFSA IMLGIAVSPI WVIMLSSVDE RNRGKQMGYV YFSWLLGLLV GMVIMNLLIK FHPTRFAFLM ALVVLIAWVL YYFVNINLTN YNTKPVKAQL KQIVDVTQRH LILFPGILLQ GAAIAALVPI LPKYATQVVK VSTVEYTVAI IIGGIGCAFS MLFLSKIIDN NSKGFMYGVI FSGFILYTIL IFGLSTITNI YIVWAIGLFI GLMYGILLPA WNTFMAGHIN PNEQEETWGV FNSVQGFGSM IGPLVGGLIT QFTNNLNNTF YFSAMIFLAL AVFYGYYFIK TNRRVKP
|
| |