| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0572 |
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| Symbol | oppD |
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| ID | 3241346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 565394 |
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| End bp | 566473 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637167237 |
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| Product | oligopeptide ABC transporter, ATP-binding protein OppD |
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| Protein accession | YP_188163 |
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| Protein GI | 57866520 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAA CGGTATTAGA AGTAAATGAT TTGCACGTTT CCTTTGATAT TGCTGCAGGA
GAAGTGCAAG CTGTCAGAGG CGTGGATTTT CATTTAAATA AAGGGGAAAC GTTAGCCATT
GTTGGAGAAT CTGGATCTGG AAAATCTGTA ACAACTAAGG CAATTACAAA ACTTTTTCAA
AAGGATACAG GAAGAATAAA AAAGGGAGAA ATCTTATTTT TAGGTGAGGA CTTAGCTCAG
AAAAGTGAAA AAGAACTGAT ACAGCTAAGA GGTCGAGATA TTTCAATGAT ATTTCAGGAT
CCTATGACTT CTTTAAATCC AACAATGCAA ATCGGAAAGC AAGTCATGGA ACCTTTGATT
AAACATAAGA AATTAAGTAA AGCAAAGGCC AAGCAAAGAG CATTGGAAAT TTTGAATTTA
GTTGGGTTAC CTCGTGCTGA AAAACGATTT AAAGCTTATC CACATCAATT TTCAGGAGGA
CAACGTCAGA GAATAGTTAT TGCAATAGCA TTGGCATGTG AGCCTAAAAT ATTAATTGCT
GATGAGCCTA CAACTGCTTT AGATGTGACA ATGCAGGCTC AAATTTTAGA TCTTATGAAA
GAACTACAAA ATAAGATTGA AACTTCAATT ATCTTTATTA CGCATGATTT AGGCGTTGTA
GCAAATATTG CGGACAAAGT AGCCGTAATG TATGGGGGAC AGATGGTTGA AACAGGGGAT
GTGAATGAAA TATTTTATGA TCCTAAACAT CCCTATACCT GGGGATTGCT TTCTTCAATG
CCTGATTTAA CAACCAGTAA TGACACGGAC TTAATTGCAA TTCCAGGTAC ACCACCAGAT
TTACTTCATC CACCAATTGG TGATGCTTTC GCACGTAGAA GTCGATATGC TTTAGATATT
GATTTTAAAG AAGAACCACC TTGGTTCAAA ATTTCACCCA CACATTTTGT TAAATCTTGG
TTATTAGATG CAAGAGCTCC AAAAGTTACG CCACCTTCAA TGGTTCAAAA ACGATTAAGA
ACAATGCCAA GTAATTATGA ACAACCACAT AGAGTAGAGA GGGTGGCTTT TAATGAGTAA
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| Protein sequence | MTETVLEVND LHVSFDIAAG EVQAVRGVDF HLNKGETLAI VGESGSGKSV TTKAITKLFQ
KDTGRIKKGE ILFLGEDLAQ KSEKELIQLR GRDISMIFQD PMTSLNPTMQ IGKQVMEPLI
KHKKLSKAKA KQRALEILNL VGLPRAEKRF KAYPHQFSGG QRQRIVIAIA LACEPKILIA
DEPTTALDVT MQAQILDLMK ELQNKIETSI IFITHDLGVV ANIADKVAVM YGGQMVETGD
VNEIFYDPKH PYTWGLLSSM PDLTTSNDTD LIAIPGTPPD LLHPPIGDAF ARRSRYALDI
DFKEEPPWFK ISPTHFVKSW LLDARAPKVT PPSMVQKRLR TMPSNYEQPH RVERVAFNE
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