Gene SERP0490 details

Gene Information

• Locus tag: SERP0490
• ID: 3241076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 481981
• End bp: 482676
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637167156
• Product: ABC transporter, permease protein
• Protein accession: YP_188082
• Protein GI: 57866403
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2011] ABC-type metal ion transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.507412
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAT CTTACGGTGA AATATTTCAC GAAATGGCGA CAATGCCAAA TGTTCAGTGG 
CCAGAGGTTT GGCAGGCAAT TTTAGAAACT CTATATATGA CTATTGTTTC GACGCTTTTT 
GCATTTGTCC TTGGACTTAT ATTAGGGGTA TTACTCTTTT TATCTGCGAA AAGTAACTCA 
TTGGCTGCTA AGATTTTCTA CACGATTGTG TCATTCATTG TTAATTTATT TAGAGCAATT 
CCATTTATCA TATTAATTTT ACTGTTAATT CCATTTACAA GTATACTTCT CGGAACAATC 
AGTGGGCCAA CTGGTGCATT ACCAGCACTT ATTATTGGTG CAGCACCATT CTACGCTAGA 
TTGGTCGAGA TTGCTTTTAA AGAAATTGAT AAAGGTGTTA TAGAGGCTGC TTGGTCAATG 
GGAGCGAACA CTTCGATAGT TGTGAGAAAA GTGCTACTTC CTGAAGCAAT GCCTGCTTTA 
GTTTCAGGTA TTACCGTTAC TGCAATTGCT TTGGTAGGTT CTACAGCTAT TGCAGGTGTT 
ATTGGCGCAG GCGGTTTAGG TAATTTAGCA TATTTAACAG GATTTACTCG AAATCAAAAT 
GATGTCATTT TAGTTTCAAC AGTATTTATT TTAATTATTG TATTTATAAT CCAGTTCCTA 
GGGGATTGGC TTACAAATAA AATCGATAAA CGCTAA 

 

Protein sequence

MGKSYGEIFH EMATMPNVQW PEVWQAILET LYMTIVSTLF AFVLGLILGV LLFLSAKSNS 
LAAKIFYTIV SFIVNLFRAI PFIILILLLI PFTSILLGTI SGPTGALPAL IIGAAPFYAR 
LVEIAFKEID KGVIEAAWSM GANTSIVVRK VLLPEAMPAL VSGITVTAIA LVGSTAIAGV 
IGAGGLGNLA YLTGFTRNQN DVILVSTVFI LIIVFIIQFL GDWLTNKIDK R