Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0328 |
Symbol | |
ID | 3241317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 331971 |
End bp | 332825 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637166997 |
Product | LysR family transcriptional regulator |
Protein accession | YP_187924 |
Protein GI | 57866252 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAG ATGATTATCG TTTGCTCATT ACTTTAGATG AGACAAAAAC TTTACGCAAA GCAGCAGAAA TTCTATATAT TTCTCAACCT GCAGTTACTC AACGTTTAAA GGCAATTGAG GCTGCATTTG GAGTTGAGAT TTTTATTCGT ACAAAAAAAC AGCTCATTAC TACGACTGAA GGTTCAATGA TTATTGAACA TGCGCGTGAT ATGCTCAAAC GTGAACGTTT ATTTTTTGAT AAAATACAAG CACATATTGG TGAAGTGAAC GGTACAATTT CAATCGGTTG CTCTTCGCTT ATTGGACAAA CATTGCTTCC TGAAGTATTA AGTCTTTATA ATTCGCAATT TCCCAATGTG GAGATACAGG TTCAAGTAGG ATCTACTGAA CAAATAAAAG CGCATCATCG AGACTACCAT GTGATGATTA CACGTGGAAA TAAAGTAATG AATTTATCGA ATACACATTT ATTTAATGAT GAACATTATT TTATATATCC TAAGGATCGT AAGGAAGATG TAACTAAACT GCCTTTTATT GAATTTCAAG CGGATCCAAT TTATATTAAC CAAATTAAAC AATGGTATAA CGATCATTTG GGACATGATT ATCACGCGAC AATCACAGTT GATCAAGTTG CCACATGTAA AGAAATGTTG CTTAGTGGTG TAGGGGTAAC TATACTACCA AAAATTATGA TGAAAAATAT CGATAAGAAC ATGTTTGAAT TTGAAAAAGT CACTATTGAT AAAAAGCCAC TTATTCGGTC AACATACATG AGTTATGACG CAAGTATGCT ACAACTTCCT CAAGTAGACG CATTCGTAAA TTTAATGTTG AACTTTATTA GATAA
|
Protein sequence | MKIDDYRLLI TLDETKTLRK AAEILYISQP AVTQRLKAIE AAFGVEIFIR TKKQLITTTE GSMIIEHARD MLKRERLFFD KIQAHIGEVN GTISIGCSSL IGQTLLPEVL SLYNSQFPNV EIQVQVGSTE QIKAHHRDYH VMITRGNKVM NLSNTHLFND EHYFIYPKDR KEDVTKLPFI EFQADPIYIN QIKQWYNDHL GHDYHATITV DQVATCKEML LSGVGVTILP KIMMKNIDKN MFEFEKVTID KKPLIRSTYM SYDASMLQLP QVDAFVNLML NFIR
|
| |