Gene SERP0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0322 
Symbol 
ID3241293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp327368 
End bp328084 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content35% 
IMG OID637166991 
Producthypothetical protein 
Protein accessionYP_187918 
Protein GI57866238 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.535102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGTA AATGGAACAA CATTAAAGAG AAAAAAGCCC AAAAAGATAA AAATACTAGT 
AGAATATATG CCAAATTTGG TAAAGAAATA TATGTAGCTG CAAAGTCTGG TGAGCCTAAT
CCAGAGTCAA ATCAAACTTT AAGATTAGTA TTAGAACGTG CAAAAACATA TTCAGTACCT
AATCATATTA TAGATAGAGC TATTGATAAG GCTAAAGGCG CTGGTGACGA AAACTACGAT
CACTTAAGAT ATGAAGGTTT TGGTCCGAAT GGTTCAATGC TTATAGTTGA CGCATTAACA
AACAATGTAA ATCGTACAGC ATCAGATGTA CGTGCTGCGT TCGGTAAGAA TGGAGGAAAT
ATGGGAGTAT CTGGTTCAGT AGCTTATATG TTTGACCATA CTGCAACCTT TGGTGTAGAA
GGTAAATCTG TAGATGAAGT CTTAGAAACA CTAATGGAGC AAGATATTGA TGTAAGAGAT
GTAATTGATG ACAATGGCTT GACTATTGTT TACGCAGAAC CAGATCAATT TGCACAAGTT
CAGGATGCAT TACGTGAAGC TGGCGTTGAG GAATTTAAAG TAGCAGAGTT TGAAATGTTA
CCTCAAACTG ATATTGAGTT GTCTGAAGAG GATCAAGCTA TTTTTGAAAA ATTAATCGAT
GCACTTGAAG ACTTGGAAGA TGTTCAAAAT GTTTTCCATA ATGTAGATTT AAAATAA
 
Protein sequence
MGRKWNNIKE KKAQKDKNTS RIYAKFGKEI YVAAKSGEPN PESNQTLRLV LERAKTYSVP 
NHIIDRAIDK AKGAGDENYD HLRYEGFGPN GSMLIVDALT NNVNRTASDV RAAFGKNGGN
MGVSGSVAYM FDHTATFGVE GKSVDEVLET LMEQDIDVRD VIDDNGLTIV YAEPDQFAQV
QDALREAGVE EFKVAEFEML PQTDIELSEE DQAIFEKLID ALEDLEDVQN VFHNVDLK