| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1943 |
|---|
| Symbol | |
|---|
| ID | 1014753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 1931943 |
|---|
| End bp | 1932980 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637317110 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_688931 |
|---|
| Protein GI | 22538080 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.643032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAA CATTAAACTA CATTAAAACC CTGACATCAA TCCCTTCACC AACAGGGTTT
ACCCAAACAA TCATGACCTA TATCATCAAA GAATTGGAAG CGTTTGGCTA CTCACCAATT
CGCACAAACA AGGGAGGCGT CATGGTTTCT CTAAAAGGAA AAAATGATAC TAAACATCGC
ATGATAACTG CTCACCTTGA TACACTTGGT GCTATGGTTA GGGCCATCAA ACCAGATGGT
CGGTTAAAAA TTGACCTTAT TGGTGGATAT ACATACAATG CCATTGAAGG AGAAAACTGT
ACTATACACC TCTCAAAAAA TGGTAAAGAA ATTTCTGGAA CTGCTCTTAT TCATCAAACT
AGTGTCCATG TTTACAAAGA CGCTGGAACT GCTGAACGTA ATCAAACAAA TATGGAAATT
CGTTTAGATG AGAAAGTAAC AACTGCTGAC GAAACACGTG CTTTAGGCAT CCAGGTCGGT
GATTTCATTT CATTTGATCC GCGTACAATC ATAACAGACA GCGGCTTTAT TAAATCACGT
TACCTAGATG ACAAGGTATC CGCTGGTATC CTAATGGAAC TTCTTTCTGT TTACAAGAAA
GAAGACATTC AACTTCCTTA TACTACTCAT TTCTACTTTA GTGCCTTTGA AGAGCTAGGA
CATGGAGCAA ATTCAAGCAT CCCAAATGAA ACTGTAGAAT ATCTAGCAGT TGATATGGGA
GCTATGGGAG ACGATCAAGA AACTGACGAA TATACTGTCT CTATCTGTGT TAAAGATGCT
TCTGGTCCTT ATCATTATGA ATTACGTCAA CATCTTGTTT CTCTAGCTGA AAACAATAAT
ATTCCTTATA AACTTGATAT TTATCCTTAT TATGGTAGTG ACGCCTCCGC TGCCATGCGT
GCTGGTGCGG AAGTTAAACA CGCGCTACTT GGTGCAGGTA TTGAATCTAG TCATTCTTAT
GAACGTACCC ATATCGATTC TATTCAAGCA ACTGAACTCT TAGTGGATGC CTATCTCAAA
AGCAATATGG TGGACTAA
|
|---|
| Protein sequence | METTLNYIKT LTSIPSPTGF TQTIMTYIIK ELEAFGYSPI RTNKGGVMVS LKGKNDTKHR
MITAHLDTLG AMVRAIKPDG RLKIDLIGGY TYNAIEGENC TIHLSKNGKE ISGTALIHQT
SVHVYKDAGT AERNQTNMEI RLDEKVTTAD ETRALGIQVG DFISFDPRTI ITDSGFIKSR
YLDDKVSAGI LMELLSVYKK EDIQLPYTTH FYFSAFEELG HGANSSIPNE TVEYLAVDMG
AMGDDQETDE YTVSICVKDA SGPYHYELRQ HLVSLAENNN IPYKLDIYPY YGSDASAAMR
AGAEVKHALL GAGIESSHSY ERTHIDSIQA TELLVDAYLK SNMVD
|
|---|
| |