Gene SAG1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1842 
Symbol 
ID1014652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1836950 
End bp1840624 
Gene Length3675 bp 
Protein Length1224 aa 
Translation table11 
GC content43% 
IMG OID637317011 
Productprophage LambdaSa2, PblB, putative 
Protein accessionNP_688832 
Protein GI22537981 
COG category[S] Function unknown 
COG ID[COG4926] Phage-related protein 
TIGRFAM ID[TIGR01665] phage minor structural protein, N-terminal region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0322365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCTTTT TACTTGATGC AAATGTAAGA ACGGTCAAAT GGAATGGCAT TCCACTACAT 
GAAGCCAGCT CTGCCATTGT CAAAGAAGAA ACCAACGGTG ATTTCTACCT GACTGTTCGC
TATCCTATCA CGGATTCAGG TATCTATCAG CTTATCAAAG AGGATATGCT GATTAAGTCG
CCTGTGCCTG TGCTGGGCGC TCAGCTGTTC CGTATCAAGA AGCCTATTGA GAATGACGAC
AGCATGGACA TCACTGCCTA TCATGTCTCT GATGACATCA TGAAGCGGTC TATCACTCCT
GTGAGTGTGG TTGGTCAAGG CTGTGCTATG GCACTGTCTC AGATGGTTCA AAATGCTAAG
ACTGGGCTAG GTGATTTCTC CTTTACCAGC GATATTATGG ACAGCCGAAC CTTTAACACG
ACTGAAACGG AAACGCTCTA CTCTGTCCTT ATGGACGGTA AACACAGTAT TGTTGGAACG
TGGGAAGGTG AGCTTGTCCG TGATAACTTT GCCTTATCTA TCAAACGTAG CCGTGGGGCT
GATCGTGGTG TTGTCATCAC AACACACAAG AACCTCAAAT CCTATCAACG AACCAAGAAC
TCTCAGGGTG TTGTCACAAG GATTCATGCA CGGTCAACCT TCAAACCTGA TGGAGCTGAA
GATGAAGTGA CGCTCAGAGT GTCTGTTGAC AGTCCACTAA TAAACTCTTA TCCCTACATC
AATGAGAAAG AGTATGAGAA CAACAACGCT GAAACCGTTG AAGACCTTAG AAAGTGGGCT
GAGGCTAAGT TTACAAATGA GGGCATTGAT AAGGTTTCTG ATGCCATTGA GATTGAAGCC
TATGAGCTTG ACGGTCAAGT TGTAAATCTG GGCGACACGG TTAACCTCAA GAGTAGAAAG
CACAGTGCTG ACCTCTACAA GAAGGCCATT GCCTACGAGT TTAACGCTTT AACGGAAGAG
TATATCTCCA TAACTTTTGA TGATAAGCCA GGAGTTGGTG GTTCTGGGGT GTCAAGTGGC
TTGTCTAATG TTGCTGATGC TATACTTGTA GCAAGTGCCA CAGCTCAGGA CGTTGCTGTT
CAAAGGGCTG TGAAAAATGC TAACGCTGCC TTTGATGCAG AGTTTGGTAA AACAAAAACA
AAAATTAATG ATGATATCGA AATCGCAAAA GCCAAAGTAG AAAGCTTTAA ATCGGAACTA
TCTAATCGCA TGGATAATCA GCTTCTTCCC CTTGCGACAG AAGCTAAGAA TTTAGCCAGT
CAGGCACAAG CAGACTTGAC CAGAAAAGAA ATAGAGCTTA GAGCTGAATT AAATAGACAA
GTCACAAGCA CAGAAGCTGT AAAAATCTCT CTAACAAATC TTAGTCACAA TATGGATATC
ATTAAGCAAA AAGCCCTAAA CGACCTTAGA GACGCAGAGA CAAGGCTAAA GGAAGCTGAT
AGCGTCCAAC AACTTGCGAC AAAGCGGGTT GAGGATAAAC TGACAGGACT TAGCACGAAA
CTGGAGTCAT TCTCTGTTGG TGGCTATAAT TATGTCATTG ACGGCGGAGA ACCTAAAGAA
CTAATGGCTA ACTTCTATGG TAAGACCTAT GATATTAATC CCCAACTACT CGAACGAACT
AGTCAAGCGA CCTTGAGTTT TAGCTATGAA GCAGAATCAA CTAGTCGTTT AGAAGTTAGA
CTTTATAAAA AGATGCACAC CGGGGACACT AGTAAGATTA CAATTATTGT CATGCCTAAC
TTTGACTTAT CTCCAGGGAA AGGCTTTATC TCTCAGAGCT TTGATTTAGG TGGTGTTATG
CCTGACCCTA GAAACCAAGC CTGGCTTGTG ATGCGGGGGA CAAATGCTAA CCCCTTGACG
CTCTCGAAAG TTAAGCTGGA ACGTGGTACC GTTGCTACAG ACTGGAATAA TCGCGATGAA
ACCTTAAAAG CTAGCTTCGC CGAATACAAG CAGACCGTTG ATGAAAACTT AGCCAACCTT
AGAACAAGTA CGGAAACCTT GGCAGGTCAA CTGACAAGTG CTGAGTCTAG CATTAGGCAG
ACGTCGGAAT CCTTTAGCAA TCGTTTAGTT AGTCTTGAGA CCTATAAAGA TAGTGAACCA
AATCGAGCTA GTCGTTACTT TGAAGCAAGC AAGTCTGAAA CCGCTAAGCA GCTATCAGCC
TTACGAACAG AGGTTAATGG CTCTTATGTG GATAAGTCAA CCTATGAGGA AAATGCAAGA
GGTTTGATAA GACGCTTTGA AAGTCTGTCA TCAGGGACAC AGAACTATGC TTTGGGGACT
GAAAGAGATG TCTATCTAAA CGTTTCAGGG ACTACCGTCT ATGACCTTTA TAGCTTCGGT
ACTACCTTAG CCGTAAAAGG GATTGAAATG GGAGATACTG TAACTATTGC ATTTAACTAT
TTTGCGGATA GTCGGACGGC TTTTGGTTCT TATGAACTGG AGCTATACGG ACATGCAGGC
AAAATCGAAC GGGTTGGTGA GGTACAGAGA ACGATATCAA ATCGTGGTAC CTATACCGCA
TCTTTTGTGG CAAACAATGC CAATTTCAGG GCAAACTCCC TTAAAATTAG ATTTACGGAT
AGCCAACTTA AGTTTAGAGT GACAACACTT CGTGTGACTA AGGGGACAAT TCCTGCGGAC
TGGAGTCCAT CTCCAGATGA CCTGAAAGCC TACTCAGATA CTAAGCTTGA ACAGACAGCT
AATGAGATTA AAGCTAGTGT AACAAGTCTT GATCATAAAA CTCTTAAGCA AACTGATATT
ACTATGACTT CTGAAGGGAT TGTCCTGAGA GCAGGCAAGA CGAGTAATGA TGTGGCAAGA
GCTATTGGCT CTTACTTTAA GGTCACTCCT GATGCTATAG CTCTGTTTAG CTCACTGATA
AAAGTTAGCG GGAACATGTT GGTTGATGGT TCTGTAACTA GTCGTAAGTT GGTAACAGGC
GCTGTCGAAA CGGGACATGT TAAGGCTGGA GCAATCACAG GAGTGCTTTT AGCAGCTGAA
GCTGTAACGG CAGAAAAACT TAAAGTCGAC CAAGCTTTCT TTAACAAGTT GATGGCCAAC
GATGCCTACT TGAAGCAACT ATTTGCCAAG TCAGCCTTCA TCACTCAGGT TCAATCCGTG
ACAATATCTG CCAGTCAGAT TTCGGGCGGT GTTATTAAAG CTTTGAATAA TGCCATGGAA
ATCCAGATGA ACAGTGGTCA GATACTTTAC TACACTGACC AAGCTGCACT GAAACGGGTT
TTGAGTGGCT ATCCTACTCA GTTTGTTAAG TTCGCAACTG GTACAGTATC TGGTAAAGGA
AATGCTGGTG TTACGGTCAT TGGTTCTAAC CGCTACGGTA CAGAATCAAC CAATGATGGT
GGATTTGTTG GAGTCCGTGC ATGGAACGGC TCAAACATTG ACTCACTTGA CTTAGTTGGT
GATGAAATCC GATTAGCAAG CTCTGCCTTT GACAATTCAG ATGGTTGGGA TGTTCGGACA
CTTGATTCAG GCTTGAAAAT CACACCACAC AATAGGGCTG CTGAACGCAA TAGCCGAATT
GAGGTTGGTG ATGTCTGGAT TTTAAAAGGA AATGGATCCT ATTCTTCTCT CAGAGATATT
TTGAACTCAT TCAATGAGAA CTTCTCAAAA GGCCCAAATG CTGACTCTTA CACTTACTAC
CCTTCAGGGT TCTAA
 
Protein sequence
MLFLLDANVR TVKWNGIPLH EASSAIVKEE TNGDFYLTVR YPITDSGIYQ LIKEDMLIKS 
PVPVLGAQLF RIKKPIENDD SMDITAYHVS DDIMKRSITP VSVVGQGCAM ALSQMVQNAK
TGLGDFSFTS DIMDSRTFNT TETETLYSVL MDGKHSIVGT WEGELVRDNF ALSIKRSRGA
DRGVVITTHK NLKSYQRTKN SQGVVTRIHA RSTFKPDGAE DEVTLRVSVD SPLINSYPYI
NEKEYENNNA ETVEDLRKWA EAKFTNEGID KVSDAIEIEA YELDGQVVNL GDTVNLKSRK
HSADLYKKAI AYEFNALTEE YISITFDDKP GVGGSGVSSG LSNVADAILV ASATAQDVAV
QRAVKNANAA FDAEFGKTKT KINDDIEIAK AKVESFKSEL SNRMDNQLLP LATEAKNLAS
QAQADLTRKE IELRAELNRQ VTSTEAVKIS LTNLSHNMDI IKQKALNDLR DAETRLKEAD
SVQQLATKRV EDKLTGLSTK LESFSVGGYN YVIDGGEPKE LMANFYGKTY DINPQLLERT
SQATLSFSYE AESTSRLEVR LYKKMHTGDT SKITIIVMPN FDLSPGKGFI SQSFDLGGVM
PDPRNQAWLV MRGTNANPLT LSKVKLERGT VATDWNNRDE TLKASFAEYK QTVDENLANL
RTSTETLAGQ LTSAESSIRQ TSESFSNRLV SLETYKDSEP NRASRYFEAS KSETAKQLSA
LRTEVNGSYV DKSTYEENAR GLIRRFESLS SGTQNYALGT ERDVYLNVSG TTVYDLYSFG
TTLAVKGIEM GDTVTIAFNY FADSRTAFGS YELELYGHAG KIERVGEVQR TISNRGTYTA
SFVANNANFR ANSLKIRFTD SQLKFRVTTL RVTKGTIPAD WSPSPDDLKA YSDTKLEQTA
NEIKASVTSL DHKTLKQTDI TMTSEGIVLR AGKTSNDVAR AIGSYFKVTP DAIALFSSLI
KVSGNMLVDG SVTSRKLVTG AVETGHVKAG AITGVLLAAE AVTAEKLKVD QAFFNKLMAN
DAYLKQLFAK SAFITQVQSV TISASQISGG VIKALNNAME IQMNSGQILY YTDQAALKRV
LSGYPTQFVK FATGTVSGKG NAGVTVIGSN RYGTESTNDG GFVGVRAWNG SNIDSLDLVG
DEIRLASSAF DNSDGWDVRT LDSGLKITPH NRAAERNSRI EVGDVWILKG NGSYSSLRDI
LNSFNENFSK GPNADSYTYY PSGF