| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1365 |
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| Symbol | |
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| ID | 1014174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1376238 |
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| End bp | 1377128 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637316541 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | NP_688363 |
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| Protein GI | 22537512 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00766831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA CAATTAAAAT AGCAGGAGTT AGGCTAGATA AAGCTTTAGC GGATAATTCT
GAACTGTCGC GTAGTCAAGC TAATGAAGAA ATTAAAAAAG GGATTGTGTT AGTAAATGGA
CAAGTAAAAA AAGCGAAATA TACTGTTCAA GAAGGAGATC GGATTACTTT TGATATTCCT
AAAGAGGAAG TACTAGATTA TCAAGCTGAA AATATCCCTT TAGATATTAT CTATCAAGAT
GATGACGTTG CTGTGGTTAA TAAGCCGCAA GGGATGGTTG TTCACCCTTC TGCAGGCCAC
AGTTCGGGCA CCTTAGTTAA CGCCTTGATG TATCATATTA AGGATTTATC ATCAATTAAT
GGCGTTGTTC GCCCAGGGAT CGTTCATCGT ATTGATAAAG ATACTTCTGG TTTATTGATG
GTTGCAAAAA ATGATAGAGC TCACCAAGTG TTGGCTGAAG AGTTAAAAGA TAAAAAATCG
CTTCGTAAAT ATTTAGCAAT TGTGCATGGT AATTTACCAA ATGATCGAGG TGTGATTGAG
GCTCCGATTG GTAGAAGCGA TAAAGATCGT AAGAAGCAAG CCGTGACTGC TAAAGGTAAG
CCAGCAATAA CTCGTTTTCA TGTTTTAGAA CGTTTTGGTG ATTATACCTT AGTTGAATTG
TCATTGGAGA CAGGTCGAAC ACACCAAATT CGGGTTCATA TGGCTTATAT TGGCCATCCT
CTAGCCGGTG ATCCTGTCTA CGGTCCCCGT AAGACTTTAG GGGGTAAAGG ACAGTTTTTG
CATGCACAAA CACTAGGTTT TACGCACCCT AGTAACGGAG AGAATTTGAT TTTTTCAGTA
GAGGTTCCGG AAATTTTTCA GACAACCTTA GAAAAGTTGA GAAAAAATTA A
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| Protein sequence | MEITIKIAGV RLDKALADNS ELSRSQANEE IKKGIVLVNG QVKKAKYTVQ EGDRITFDIP
KEEVLDYQAE NIPLDIIYQD DDVAVVNKPQ GMVVHPSAGH SSGTLVNALM YHIKDLSSIN
GVVRPGIVHR IDKDTSGLLM VAKNDRAHQV LAEELKDKKS LRKYLAIVHG NLPNDRGVIE
APIGRSDKDR KKQAVTAKGK PAITRFHVLE RFGDYTLVEL SLETGRTHQI RVHMAYIGHP
LAGDPVYGPR KTLGGKGQFL HAQTLGFTHP SNGENLIFSV EVPEIFQTTL EKLRKN
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