Gene SAG1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1198 
SymbolrfbB 
ID1014005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand- 
Start bp1204767 
End bp1205813 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content41% 
IMG OID637316383 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionNP_688207 
Protein GI22537356 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TTAAAAACAT TATCGTAACT GGTGGAGCTG GTTTCATCGG ATCAAACTTT 
GTACACTATG TTTACAATAA CCACCCAGAT GTTCATGTAA CTGTCCTTGA TAAATTGACA 
TATGCAGGTA ACCGTGCTAA CATTGAAGCC ATTCTTGGTG ATCGTGTTGA GTTAGTTGTT 
GGTGACATCG CTGACGCTGA ATTGGTAGAC AAGTTGGCTG CCAAAGCAGA TGCTATTGTT 
CACTATGCGG CTGAGAGCCA CAATGACAAC TCACTTAACG ATCCAAGTCC ATTTATCCAT 
ACAAACTTTA TCGGAACTTA CACTTTGCTT GAAGCAGCTC GTAAATACGA TATCCGTTTC 
CACCACGTGT CAACTGATGA AGTTTATGGA GATCTGCCAC TTCGTGAAGA CCTTCCAGGA 
AATGGTGAAG GACCAGGTGA AAAATTCACT GCTGAAACAA AATACAATCC ATCATCACCT 
TACTCATCAA CTAAGGCAGC TTCTGACCTT ATCGTTAAGG CATGGGTACG TTCCTTCGGC 
GTAAAAGCGA CCATTTCGAA CTGTTCAAAT AACTATGGAC CATACCAACA CATCGAAAAA 
TTCATTCCAC GTCAAATTAC AAATATCTTG GCAGGAATCA AACCGAAACT TTATGGTGAA 
GGTAAAAACG TCCGTGACTG GATCCACACA AATGATCATT CAACAGGTGT CTGGGCTATT 
TTGACTAAGG GTCGTATTGG TGAAACATAC CTTATTGGTG CCGACGGTGA GAAAAACAAC 
AAGGAAGTTC TTGAACTTAT CCTTGAGAAA ATGGGTCAAC CAAAAGACGC TTACGATCAC 
GTAACTGACC GTGCTGGACA CGACCTTCGT TACGCTATCG ATTCTACAAA ATTGCGTGAA 
GAACTTGGTT GGGAACCACA ATTCACAAAC TTCTCAGAAG GTTTGGAAGA AACAATCAAC 
TGGTACACTG AAAACCAAGA TTGGTGGAAA GCAGAGAAAG AAGCAGTTGA AGCTAACTAC 
GCTAAAACGC AAGAAGTCAT TAACTAA
 
Protein sequence
MTEFKNIIVT GGAGFIGSNF VHYVYNNHPD VHVTVLDKLT YAGNRANIEA ILGDRVELVV 
GDIADAELVD KLAAKADAIV HYAAESHNDN SLNDPSPFIH TNFIGTYTLL EAARKYDIRF 
HHVSTDEVYG DLPLREDLPG NGEGPGEKFT AETKYNPSSP YSSTKAASDL IVKAWVRSFG 
VKATISNCSN NYGPYQHIEK FIPRQITNIL AGIKPKLYGE GKNVRDWIHT NDHSTGVWAI 
LTKGRIGETY LIGADGEKNN KEVLELILEK MGQPKDAYDH VTDRAGHDLR YAIDSTKLRE 
ELGWEPQFTN FSEGLEETIN WYTENQDWWK AEKEAVEANY AKTQEVIN