| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1167 |
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| Symbol | cpsM |
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| ID | 1013974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus agalactiae 2603V/R |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004116 |
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| Strand | - |
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| Start bp | 1171859 |
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| End bp | 1172584 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 637316352 |
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| Product | polysaccharide biosynthesis protein CpsM(V) |
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| Protein accession | NP_688176 |
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| Protein GI | 22537325 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3774] Mannosyltransferase OCH1 and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.10639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATACCTA AAGTTATACA TTATTGTTGG TTTGGAGGAA ATCCCTTACC AGATAATTTA
AAGAAATATA TAAAAACTTG GAGAGAACAA TGTCCGGATT ATGAAATTAT TGAATGGAAT
GAGCATAATT ATGATGTTAG TAAAAATGTT TTTATGAGAG AAGCATATAC TAAGAAGAAT
TTTGCTTATG TTTCTGACTA TGCAAGATTG GATATTATTT ATACTTATGG GGGGTTCTAT
CTAGATACTG ATGTGGAGCT TTTAAAAAGT TTAGATCCTT TGAGGATTCA TGAGTGTTTT
CTAGCAAGGG AGATTAGTTG TGATGTGAAT ACAGGATTAA TAATTGGCGC TGTTAAAGGA
CATCACTTTT TAAAATCAAA TATGTCTATA TATGACAAAA GTGATTTAAC TTCTCTTAAT
AAGACATGTG TAGAGGTTAC AACTAATTTA TTGATAAACA GAGGGCTTAA GAATAAGAAT
ATTATTCAAA AGATTGATGA TATAACAATA TATCCGAGAA ATTATTTTAA TCCAAAGAAT
TTATTAACAG GTAAGGTTGA TTGTCTGACT AGTGTTACCT ATTCTATACA TCATTACGAA
GGAAGTTGGA AAAGTTCTTC ATTTATTTCA GATTCTCTAA AGATTAGAGT AAGGCTCATA
ATTGATTTTT TATTTGGATA TGGTACTTAT AGAATGCTTC TAAGGTTTCT AAAGTTAAAG
AAATAG
|
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| Protein sequence | MIPKVIHYCW FGGNPLPDNL KKYIKTWREQ CPDYEIIEWN EHNYDVSKNV FMREAYTKKN
FAYVSDYARL DIIYTYGGFY LDTDVELLKS LDPLRIHECF LAREISCDVN TGLIIGAVKG
HHFLKSNMSI YDKSDLTSLN KTCVEVTTNL LINRGLKNKN IIQKIDDITI YPRNYFNPKN
LLTGKVDCLT SVTYSIHHYE GSWKSSSFIS DSLKIRVRLI IDFLFGYGTY RMLLRFLKLK
K
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