| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG1148 |
|---|
| Symbol | |
|---|
| ID | 1013952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 1151010 |
|---|
| End bp | 1151705 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637316330 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_688157 |
|---|
| Protein GI | 22537306 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000875943 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTT TAACGAATAA CCCTATCTTT GGTATTATGT TAACCGTATG GGCGTATTAC
ATTGGCATAA GGATTTTTAG AAAATATCCT TCCCCTGCAA CAACTCCACT TCTTTTGGCG
ACTATTTTAT TAATTGCTTT TTTAAAATTA ACACATATCT CCTATAAAGA TTACTACAAT
GGCGGTTCAT TTCTAACGAT GTTAATTACG CCTTCAACGG TTGTATTGGC TATTCCTCTC
TATAGAACCT TTCATTTAAT GAAGCATCAC ATTAAAAGCA TTAGCATTAG CATCATCTTA
GCTTCTGTTA TCAACACAGT TTTTACCGCA ATAGTTGCTA AGTTTTTTGG TATGAAATAT
TTCTTAGCAA TCTCACTTTT CCCAAAGTCC GTAACTACAG CTATGGCCGT TGGAATTACA
AGTAAAGCAG GTGGATTAGC TACTATCACT CTGGTCGTAG TTGTTATTAC AGGCATCTTA
ACAAGCGTTT TGGGTCCTAT TTTTCTAAAA TTATTAAGGA TAGAAGATCC TGTTGCTATA
GGGCTCGCGC TAGGAGGAAC TGGGCATGCT ATAGGAACTG GACAAGCCTT AAAATATGGC
CAAGTTCAAG GCGCCATGGC TGGACTAGCA ATTGGTATCA CAGGGATTTG CTATGTTATT
GTCAGTCCTT TAGTTGCAGG CTTAATATTG AAATGA
|
|---|
| Protein sequence | MATLTNNPIF GIMLTVWAYY IGIRIFRKYP SPATTPLLLA TILLIAFLKL THISYKDYYN
GGSFLTMLIT PSTVVLAIPL YRTFHLMKHH IKSISISIIL ASVINTVFTA IVAKFFGMKY
FLAISLFPKS VTTAMAVGIT SKAGGLATIT LVVVVITGIL TSVLGPIFLK LLRIEDPVAI
GLALGGTGHA IGTGQALKYG QVQGAMAGLA IGITGICYVI VSPLVAGLIL K
|
|---|
| |