Gene SAG1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG1109 
SymbolpotC 
ID1013913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand
Start bp1117822 
End bp1118598 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content33% 
IMG OID637316291 
Productspermidine/putrescine ABC transporter, permease protein 
Protein accessionNP_688118 
Protein GI22537267 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TCGCAAATAT CTATTTAGCA CTTGTTTTTA TTATCCTTTA TATTCCTATT 
ATTTATTTGA TTTTTTATTC TTTCAATAAA GGTGGGGATA TGAATTCTTT TACTGGATTC
ACCTTTAGTC ACTATGGAGA ACTGTTTCAG GATAGCCGCT TAATGCTAAT TTTAGTGCAA
ACATTCTTTT TGGCTTTTCT TAGCGCCTTA TTAGCTACAA TTATTGGTAC CTTTGGAGCT
ATTTGGATTT ATCAGGTAAG ACGTAGACAT CAAACCTCTA TTTTATCGCT TAATAATATC
CTTTTAGTAG CACCAGATGT TATGATTGGT GCAAGTTTTC TCTTAGTATT TACTGTTATT
GGTTTACAGT TAGGTTTCAC TTCTGTATTA TTGAGCCATG TTGCATTCTC TATTCCTATT
GTTGTTTTAA TGGTCTTACC TCGTTTAAAA GAAATGAATG ATGATATGAT TAATGCTTCC
TATGATTTAG GAGCTTCAAC TTGGCAAATG CTTAAAGAAG TTATGTTACC CTATTTGTCG
TCGGGTATTA TTTCAGGTTT CTTTATGGCT TTCACTTACT CGCTAGATGA TTTTGCGGTT
ACTTTCTTTG TTACAGGTAA TGGCTTTTCA ACGCTTTCAG TAGAAATCTA TTCACGCGCA
CGTCGCGGTA TATCATTGGA AATTAACGCC TTGTCAACTA TTGTCTTTTT ATTTAGTATT
TTATTGGTAA TTGGTTATTA CTATATTTCG AAAGAGAAGG GAGAAAAGAA TGCGTAG
 
Protein sequence
MKKFANIYLA LVFIILYIPI IYLIFYSFNK GGDMNSFTGF TFSHYGELFQ DSRLMLILVQ 
TFFLAFLSAL LATIIGTFGA IWIYQVRRRH QTSILSLNNI LLVAPDVMIG ASFLLVFTVI
GLQLGFTSVL LSHVAFSIPI VVLMVLPRLK EMNDDMINAS YDLGASTWQM LKEVMLPYLS
SGIISGFFMA FTYSLDDFAV TFFVTGNGFS TLSVEIYSRA RRGISLEINA LSTIVFLFSI
LLVIGYYYIS KEKGEKNA