Gene SAG1004 details

Gene Information

• Locus tag: SAG1004
• ID: 1013808
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 1013163
• End bp: 1013864
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637316188
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_688015
• Protein GI: 22537164
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00659829
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTATA TTGAAATGAA GCATTCCTAT AAGCGTTATC AAACAGGTGA AACCGAAATT 
GTTGCTAACA ATGATATTAG TTTCAGTATT GAAAGAGGTG AGTTGGTGGT TATTCTTGGT 
GCATCCGGCG CTGGCAAATC TACTGTTCTC AATATACTAG GAGGGATGGA TAGTAATAGT 
GAAGGTGAAG TTTTAATTGA TGGTAAGAAT ATTGCTAATT ATACCATCAG GGAATTGACT 
CGTTACCGTA GATATGATGT CGGGTTTGTT TTTCAATTCT ATAACTTAGT CCCTAATCTA 
ACAGCACTAG AGAATGTAGA ATTGGCTTCA GAAATTGTTC CAAAGGCATT AGATGCCCAA 
CAGGCATTAG AAAACGTAGG TTTGGGACAC CGTATCAATC ATTTTCCAGC ACAGCTTTCC 
GGTGGCGAAC AGCAACGCGT TGCAATAGCA CGAGCTATTG CCAAAAAACC TAAACTGTTA 
CTTTGTGATG AACCTACTGG TGCTTTAGAT TACCAAACTG GAAAACAAGT ACTAGCCATC 
CTGCAAAAGA TGGCGCAATC AAAAGAAACA ACTGTGATCA TTGTTACTCA TAATACTGCC 
TTAGCGCCAA TTGCAAATCG CGTGATCCAT ATGCATGATT CAAAAATCAG TGATATTGTA 
ATAAACGAGA ATCCAAGTGA TATTCAGAAC ATAGAATATT AG 

 

Protein sequence

MSYIEMKHSY KRYQTGETEI VANNDISFSI ERGELVVILG ASGAGKSTVL NILGGMDSNS 
EGEVLIDGKN IANYTIRELT RYRRYDVGFV FQFYNLVPNL TALENVELAS EIVPKALDAQ 
QALENVGLGH RINHFPAQLS GGEQQRVAIA RAIAKKPKLL LCDEPTGALD YQTGKQVLAI 
LQKMAQSKET TVIIVTHNTA LAPIANRVIH MHDSKISDIV INENPSDIQN IEY