Gene SAG0723 details

Gene Information

• Locus tag: SAG0723
• Symbol: rnc
• ID: 1013527
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 716723
• End bp: 717433
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637315911
• Product: ribonuclease III
• Protein accession: NP_687738
• Protein GI: 22536887
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGAAA TCAAGGAGAA AAAAATGAAA GAATTAAGAT CAAAGCTGGA AAAAGACTAT 
GGTATTGTTT TTGCTAATCA AGAATTATTA GATACAGCTT TTACCCATAC ATCATACGCA 
AATGAGCATC GCCTCCTAAA CATTTCACAT AATGAACGTT TGGAATTTTT AGGAGACGCT 
GTTCTACAAT TACTTATTTC ACAGTATCTT TTTACAAAGT ACCCTCAAAA GGCAGAAGGT 
GATTTATCAA AATTACGTTC AATGATTGTT CGTGAGGAAA GTCTTGCAGG TTTTTCACGT 
CTATGTGGCT TTGATCACTA TATTAAACTT GGAAAAGGAG AAGAAAAATC TGGTGGACGT 
AATCGTGACA CTATTTTAGG AGATTTATTT GAGGCTTTTT TAGGAGCTTT ATTATTAGAC 
AAAGGTGTTG AAGTGGTTCA TGCCTTTGTT AACAAGGTAA TGATCCCTCA CGTTGAAAAA 
GGGACCTATG AGCGTGTTAA AGATTACAAG ACAAGCTTGC AAGAATTACT TCAATCTCAT 
GGGGATGTAA AAATAGATTA TCAAGTTACT AATGAAAGTG GTCCAGCACA TGCAAAGGAA 
TTTGAGGTGA CTGTATCTGT CAACCAAGAA AATTTGAGCC AAGGAATTGG ACGATCAAAG 
AAAGCTGCTG AACAAGACGC TGCCAAAAAT GCTTTAGCAA CGTTACAATG A 

 

Protein sequence

MIEIKEKKMK ELRSKLEKDY GIVFANQELL DTAFTHTSYA NEHRLLNISH NERLEFLGDA 
VLQLLISQYL FTKYPQKAEG DLSKLRSMIV REESLAGFSR LCGFDHYIKL GKGEEKSGGR 
NRDTILGDLF EAFLGALLLD KGVEVVHAFV NKVMIPHVEK GTYERVKDYK TSLQELLQSH 
GDVKIDYQVT NESGPAHAKE FEVTVSVNQE NLSQGIGRSK KAAEQDAAKN ALATLQ