Gene SAG0378 details

Gene Information

• Locus tag: SAG0378
• Symbol: nusA
• ID: 1013173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 386317
• End bp: 387468
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637315576
• Product: transcription elongation factor NusA
• Protein accession: NP_687412
• Protein GI: 161485616
• COG category: [K] Transcription
• COG ID: [COG0195] Transcription elongation factor
• TIGRFAM ID: [TIGR01953] transcription termination factor NusA

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.138784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAAG AAATGCTAGA AGCCTTCCGT ATTTTGGAAG AAGAAAAACA CATTAATAAA 
GAAGATATTA TTGATGCAGT TACTGAGTCA CTAAAATCTG CCTATAAGCG TCGTTATGGT 
CAATCAGAAT CATGCGTTAT TGAATTTAAC GAGAAGAAAG CAGACTTTAC CGTCTATACT 
GTTCGTGAAG TTGTTGATGA AGTTTTTGAT AGCCGTTTGG AAATTAGCCT AAAAGATGCC 
CTTGCTATTA GCTCAGCGTA TGAACTTGGT GATAAGATTC GCTTTGAGGA ATCTGTTACA 
GAATTTGGAC GCGTGGCAGC TCAGTCAGCA AAACAAACTA TTATGGAAAA AATGCGTCGT 
CAAATGCGTG AAGTAACCTT CAATGAATAC AAACAACACG AAGGTGAAAT TATGACTGGT 
ACTGTTGAAC GATTTGACCA ACGTTTTATT TATGTCAATC TCGGTTCACT TGAGGCGCAA 
TTATCGCATC AAGATCAGAT TCCTGGAGAG AGCTTTAAAT CTCATGATAT GATTGATGTT 
TATGTCTATA AAGTGGAGAA TAATCCTAAA GGAGTCAACG TTTTTGTTAG CCGTAGTCAT 
CCAGAGTTTA TCAAACGCAT TATGGAGCGA GAAATTCCAG AAGTATTTGA TGGAACTGTT 
GAGATTATGA GCGTCTCTCG TGAGGCTGGA GATCGTACTA AAGTTGCTGT ACGCAGTCAT 
AATTCAAACG TTGATGCGAT TGGAACAATT GTTGGACGCG GTGGAAGTAA CATTAAAAAA 
GTTATCAGTA ATTTCCATCC TAAACGCGTT GATGCTAAAA CAGGATTGGA GATCCCGGTT 
GAAGAAAACA TTGATGTTAT TCAATGGGTT GAAGATCCAG CGGAATTCAT TTACAATGCT 
ATTGCACCAG CCGAAGTTGA TATGGTACTT TTTGATGATG AAGATACAAA ACGTGCTACT 
GTAGTTGTTC CAGATAGCAA GTTATCGCTA GCTATTGGTC GCCGAGGACA AAATGTGCGT 
TTAGCAGCTC ATTTGACTGG CTATCGTATT GATATTAAAT CTGCAAGTGA ATACGAAAAA 
ATGGAAGCGC AAGAACTTCA AACTGAGGAA GTAGCTCAAG AATCTGAAGT TATTTCAGAT 
AAGGCAGAAT AA 

 

Protein sequence

MSKEMLEAFR ILEEEKHINK EDIIDAVTES LKSAYKRRYG QSESCVIEFN EKKADFTVYT 
VREVVDEVFD SRLEISLKDA LAISSAYELG DKIRFEESVT EFGRVAAQSA KQTIMEKMRR 
QMREVTFNEY KQHEGEIMTG TVERFDQRFI YVNLGSLEAQ LSHQDQIPGE SFKSHDMIDV 
YVYKVENNPK GVNVFVSRSH PEFIKRIMER EIPEVFDGTV EIMSVSREAG DRTKVAVRSH 
NSNVDAIGTI VGRGGSNIKK VISNFHPKRV DAKTGLEIPV EENIDVIQWV EDPAEFIYNA 
IAPAEVDMVL FDDEDTKRAT VVVPDSKLSL AIGRRGQNVR LAAHLTGYRI DIKSASEYEK 
MEAQELQTEE VAQESEVISD KAE