| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SAG0330 |
|---|
| Symbol | celB |
|---|
| ID | 1013119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus agalactiae 2603V/R |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004116 |
|---|
| Strand | + |
|---|
| Start bp | 338026 |
|---|
| End bp | 339327 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637315522 |
|---|
| Product | PTS system, cellobiose-specific IIC component |
|---|
| Protein accession | NP_687364 |
|---|
| Protein GI | 22536513 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC |
|---|
| TIGRFAM ID | [TIGR00359] phosphotransferase system, cellobiose specific, IIC component
[TIGR00410] PTS system, lactose/cellobiose family IIC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.240964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGT TTGATAGTCA GAAAATAATT ACTCCGATTA TGAAGTTTGT CAATATGCGA
GGGATTATTG CACTCAAAGA TGGCATGCTA GCAATTCTAC CACTAACAGT TGTTGGGAGT
CTCTTTTTAA TATTAGGGCA GCTTCCATTT AAAGGTCTTA ATCAAGCCAT AGCTAATGTT
TTTGGACCAG AATGGACAGA ACCATTTATG CAAGTTTATT CAGGAACTTT TGCGATTATG
GGCTTGATTT CCTGTTTTGC AATTGCTTAT GCTTATGCTA AAAATAGTAG TGTAGAACCG
TTACCTGCTG GCGTTTTATC ACTTTCGTCT TTCTTTATTT TAATGAAATC ATCTTATATT
CCTGTAAAAG GAGAAGCAAT AGCGGATGCT ATTTCTAAGG TTTGGTTTGG CGGTCAGGGG
ATTATTGGAG CAATTATTAT TGGCTTAGTA GTTGGTGCTA TCTATACATG GTTTATCCAA
CATCATATTG TTATAAAAAT GCCAGAGCAA GTACCACAGG CAATAGCAAA ACAATTTGAA
GCTATGATTC CAGCTTTTGT TATCTTTCTT TTATCGATGA TTGTTTATTT GATTGCTAAG
GTAACAACTG GAGGTACCTT TATTGAGATG ATTTATGATA TCATTCAAGT ACCGTTGCAA
GGCTTAACAG GCTCACTTTA TGGAGCAATT GGGATTGCTT TCTTTATTTC ATTCTTATGG
TGGTTTGGTG TCCATGGCCA ATCTGTGGTG AATGGTATTG TGACTGCTTT GTTACTATCC
AATTTAGATG CCAATAAGTC TTTATTAGCA GCAAATCGCT TAACATTAGA TAATGGCGCT
CACATTGTAA CACAGCAGTT TTTGGATAGT TTCTTGATTT TATCGGGCTC AGGAATAACT
TTTGGACTAG TTATTGCGAT GCTTTTTGCA GCAAAATCAA AACAATACAA GGCACTTGGG
AAAGTGGCCG CTTTTCCCGC AATTTTCAAT GTTAACGAGC CAATCGTCTT TGGCTTTCCA
ATCGTAATGA ATCCTGTGAT GTTTCTGCCT TTTATTTTAG TACCAGTTTT GGCAGCTTTA
ATTGTTTATG GAGCTATTGC GGTTGGTTTT ATGCAACCAT TCTCAGGTGT TACTTTACCA
TGGAGTACTC CAGCAATTAT TTCTGGATTC ATGGTAGGTG GTTGGCAAGG TGCACTCGTC
CAAATAGTCA TTTTAGCTAT CTCAACTGCT GTTTACTTCC CATTCTTTAA AATCCAAGAT
AATATTACTT ACAAAAATGA ATGTGAAATG GAAAGGGGAT AG
|
|---|
| Protein sequence | MSKFDSQKII TPIMKFVNMR GIIALKDGML AILPLTVVGS LFLILGQLPF KGLNQAIANV
FGPEWTEPFM QVYSGTFAIM GLISCFAIAY AYAKNSSVEP LPAGVLSLSS FFILMKSSYI
PVKGEAIADA ISKVWFGGQG IIGAIIIGLV VGAIYTWFIQ HHIVIKMPEQ VPQAIAKQFE
AMIPAFVIFL LSMIVYLIAK VTTGGTFIEM IYDIIQVPLQ GLTGSLYGAI GIAFFISFLW
WFGVHGQSVV NGIVTALLLS NLDANKSLLA ANRLTLDNGA HIVTQQFLDS FLILSGSGIT
FGLVIAMLFA AKSKQYKALG KVAAFPAIFN VNEPIVFGFP IVMNPVMFLP FILVPVLAAL
IVYGAIAVGF MQPFSGVTLP WSTPAIISGF MVGGWQGALV QIVILAISTA VYFPFFKIQD
NITYKNECEM ERG
|
|---|
| |