Gene SAG0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSAG0188 
Symbol 
ID1012962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus agalactiae 2603V/R 
KingdomBacteria 
Replicon accessionNC_004116 
Strand+ 
Start bp205711 
End bp206688 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content38% 
IMG OID637315366 
Productoligopeptide ABC transporter, permease protein 
Protein accessionNP_687223 
Protein GI22536372 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACATA TTACCACTGT AGTTATCTGG AAGATACTTA GGTGTTTGTC ACTCGTTTTT 
GGAGTATCAA TTTTGACCTT TATTTTACTA AAACAATCAC CGGTTGATCC AGTCATGGCA 
AGTGTCAATT ATGACACGTC ACTAACCCCT GTTCAGTACA AAGCGATTGC TCACCACTAT 
GGTTTGGATA AGCCAGCTCC GGTCCAGTAT TTTATTTGGT TAAAAAATTT TATACAGGGA 
CATTTAGGGA CTTCACTAGT TTATCGGCAA CCTGTTATTG ATATTATTAG ATCACGGGCA 
GGTGCCTCTT TCATACTTAT GGGACTCTCC TGGGTCTTAT CGGGTCTTAT TGGATTTATC 
TTAGGAACTT TATCAGCTTT CCATCAAGGG AAATTGCTTG ATCGAATTGT AAGGTGGTTT 
TCTTACCTTC AGATATCAGT ACCAACTTTT TGGATTGGGC TCATTTTTTT ATTAATCTTT 
TCTGTCCAGC TGGGGTGGTT CCCGATTGGT ATTTCTTCCC CGATAGGTAC TTTGAGTCAA 
GATATTACGT TAGCTGATCG TATTAAGCAC CTTATTTTAC CTGTTTTCAC GCTAAGTATT 
CTAGGCATTG CCAATGTAAC TCTTCATACT AGAACTAAAA TGATGTCGGT ACTTTCTAGT 
GAATATGTCT TATTTGCCAG AGCGCGTGGG GAAACGGAAT GGCAAATTTT TAAAAATCAT 
TGTCTTAGAA ATGCTATCGT ACCAGCTATT ACACTGCATT TTTCCTATTT TGGAGAATTG 
TTTGGAGGAT CCGTTCTTGC TGAGCAAGTT TTCTCATATC CAGGACTAGG GTCTACCCTA 
ACTGAAGCAG GACTTAAAAG TGATACACCG CTACTTCTAG CTATTGTGAT GATAGGGACA 
TTATTTGTTT TTGCGGGCAA TCTTATTGCG GATATTTTAA ACAGCATAAT CAATCCACAG 
TTAAGGAGAA AAGTATGA
 
Protein sequence
MKHITTVVIW KILRCLSLVF GVSILTFILL KQSPVDPVMA SVNYDTSLTP VQYKAIAHHY 
GLDKPAPVQY FIWLKNFIQG HLGTSLVYRQ PVIDIIRSRA GASFILMGLS WVLSGLIGFI 
LGTLSAFHQG KLLDRIVRWF SYLQISVPTF WIGLIFLLIF SVQLGWFPIG ISSPIGTLSQ 
DITLADRIKH LILPVFTLSI LGIANVTLHT RTKMMSVLSS EYVLFARARG ETEWQIFKNH 
CLRNAIVPAI TLHFSYFGEL FGGSVLAEQV FSYPGLGSTL TEAGLKSDTP LLLAIVMIGT 
LFVFAGNLIA DILNSIINPQ LRRKV