Gene Rxyl_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3200 
Symbol 
ID4114997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp3212141 
End bp3212851 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID638037965 
Producthypothetical protein 
Protein accessionYP_645917 
Protein GI108805980 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCAACG GCACGAACCT GGAGCAGTTC GCCGAGGTGG CCTCCACGGG GAGGTTCACC 
CTGCAGAACT CCTCGATGCT CAAGGTCCGC CTCGAGGGCG AGGAGGTGCA GGCCCTTCTG 
GGGTCCATGG TCGCCTACCA GGGGGACATC CGCTTCGAGC ACAAGGGAGG CGGGCTGGGG 
AGGCTGTTCA AGCGGGCGCT CACCGGCGAG GGCGTCCGGC TAATGTCCTG CCGCGGCACG 
GGCGACCTCT TTCTCGCCCG CGACAAGCGG AAGATCATGA TCATAGACCT CGCCGGCGAG 
CAGATGACCG TCAACGGGGA CAACGTGCTG GCCTTCGAGC CGGGCATAGA CTGGGACATC 
CGGCGCGTGG AGGGCGCGGG GAGGCTCGCC GGGGGGCTGT TCAACGTGGT GCTGGAGGGC 
AGCGGACAGG TGGCCGTCAC CTCCGACGGC GAGCCGGTGC TGCTGGACAC CAACACGCCG 
ACCTTCGCGG ACCCGGACTC GGTCGTGGCC TGGAGCGGGG GGGTGCGCAC CCGGATAAGG 
AGCGACGTCT CCTTCAAGAC CTTCCTCGGC CGCGGCAGCG GGGAGACCTT CCAGATAGCC 
TTCGAGGGGC CGGGGTGGGT GCTGGTGCAG CCCTCGGAGG GGCCGGTGGT CCCCCCGCAC 
TCCCACGGCT CCTCTGGGGG AGGCGGCGTG GAGCTGGACT TCGGCGACTG A
 
Protein sequence
MGNGTNLEQF AEVASTGRFT LQNSSMLKVR LEGEEVQALL GSMVAYQGDI RFEHKGGGLG 
RLFKRALTGE GVRLMSCRGT GDLFLARDKR KIMIIDLAGE QMTVNGDNVL AFEPGIDWDI 
RRVEGAGRLA GGLFNVVLEG SGQVAVTSDG EPVLLDTNTP TFADPDSVVA WSGGVRTRIR 
SDVSFKTFLG RGSGETFQIA FEGPGWVLVQ PSEGPVVPPH SHGSSGGGGV ELDFGD