| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_3047 |
|---|
| Symbol | |
|---|
| ID | 4114847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 3055393 |
|---|
| End bp | 3056181 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638037815 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_645767 |
|---|
| Protein GI | 108805830 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCC TGCTGGAGGG GAAGAGGGCC TTTGTCACCG GCAGCGCTCG GGGGATAGGC
TTCGCTGTGG CCGAGCGTTT TTGCGAAGAA GGAGCGGTCG TGGCGCTCGG GGACGTTTGT
CGGGAGGAAG TCTCGGAAGC CGCGCGCAGG CTGCAGGATG CCGGGCACGA AGCCTTTGAG
CTGCACGTCA ACGTCGCCGA TGAAGCCTCT GTTGAAGAGG CCGCCCGGAT CTGCAACGAG
CGGCTCGGCG GCGTAGACGT CTTGGTGGCT AATGCCGGGG TTCTGTACCT GGCCCCGGTG
TTGCAGACCT CCAGGGAGGC GTGGGAGAGG GTTCTGGCGG TCAACCTCAC GGGTGCTTTC
CTCACCTGCA AGGCGTTCGC ACGCGGGATG GTCGAGCGCG GCCGCGGGGG CAGGATCGTC
GTTACCTCAT CGCTCTTCGG GCGGCGTGGC GGGAGGGAGA ACGCCGCCTA CTCGGCGTCG
AAGTTCGGGA CCATCGGGCT CGTCGAGTCG CTGGCCGCCG AGCTCGCGCC GCACGGCATA
CTGGTAAACG CCGTGTGCCC CGGGCAGGTG GACACGGAGA TGATGTCCGG CCTCTTTGAG
CGGAGAGCCG GGCTGCGCGG CATGGAGGCC GGGGAGTTGG AGGAGGAGAT GATCTCACGC
ATCCCCCTCG GCCGGATGGC GAGCCCCCGC GAGATCGCGG ACGCCTTCGT CTTTCTGGCC
TCCGGCCTCT CCGGCTACAT GACCGGCCAG AGCCTCGTGG TGGACGGCGG GTGGTCGGTG
GGACCGTGA
|
|---|
| Protein sequence | MSGLLEGKRA FVTGSARGIG FAVAERFCEE GAVVALGDVC REEVSEAARR LQDAGHEAFE
LHVNVADEAS VEEAARICNE RLGGVDVLVA NAGVLYLAPV LQTSREAWER VLAVNLTGAF
LTCKAFARGM VERGRGGRIV VTSSLFGRRG GRENAAYSAS KFGTIGLVES LAAELAPHGI
LVNAVCPGQV DTEMMSGLFE RRAGLRGMEA GELEEEMISR IPLGRMASPR EIADAFVFLA
SGLSGYMTGQ SLVVDGGWSV GP
|
|---|
| |