| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2925 |
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| Symbol | |
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| ID | 4115881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 2932527 |
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| End bp | 2934119 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638037695 |
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| Product | delta-1-piperideine-6-carboxylate dehydrogenase |
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| Protein accession | YP_645647 |
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| Protein GI | 108805710 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.739549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCG CGGAAGAGAC CGGAAAGCGG GAGACACCCG CCCGCACCGT AGCCTCGAGG
ATAGGCGGCA GGCCGGCGGA GGAGGCCCCG GGGGGTCGCC TCACCTCCGC CAACCCGGCG
CGCCTGGAGG AGGCCGTGGC GGAGGTCCTG CTGGGGGACG CCTCGACCTT CGTCGAGGCG
TGCCGGGCGG CCAGGGAGGC CCAGGGGGAG TGGGCGGCCG TCCCCGCCCC CATAAGGGCG
CAGGTGGTCA AGAGGATCGG GCGCCTGGTC GAAAAGAACA AGGAGGCGCT GGCCCGGCTG
GTCACGCGCG AGGTGGGCAA GCCCTACGCG GAGTCCCTCG GGGAGGTGCA GGAGATCATC
GACACCTGCG ACTTCTTCAC CGGCGAGGGG CGCAGGCTCT ACGGCCACAC CGTCCCCTCC
GAGATGCCCG ACAAGCAGCT CTTCACCTTC CGGGTGCCGG TGGGGGTGGC GGCGGTCATC
ACCGCGGGGA ACTTCCCCGT CGCCGTCCCC TCCTGGTACC TGGTGCCCGC GATCCTCTGC
GGCAACGCGG TGGTCTGGAA GCCCGCGGAG TACGCCGCGG CGGCGGGCGA CGCGCTGGCG
CAGCTCTTCT TCCACGGCGG GCTGCCAGAA GGGGTGCTGA ACGTGGTGCA GGCCCGGGGC
GAGGCGACCT TCGAGGGCCT CGAGCGGGCG CTCGGGGAGG GGCTCGTGGA CAAGGTGGGC
TTCACCGGCT CCACCGAGGT GGGGAGCAGG ATCGGGGAGC TCTGCGGGCG CCACCGCCAG
TCGCCCTGCC TGGAGCTCGG CGGCAAGAAC CCGCTCGTGG TCATGCCCGA CGCGAACCTG
GACCTGGCCG TCGAGGGGGC GCTCTTCTCC GGCTTCGGGA CCGCCGGGCA GCGGTGCACC
TCGCTGGGGA CCGCCATCGT CCACGAGTCG GTCTACGGGG AGTTCCTCTC GCGGTTCGAC
CGGGCGGTGA GGGAGGCCCC CGTCGGCGAC CCGATGCGGG AGGTGCTCTA CGGCCCCATG
ATCAGCGAGA AGTTCTACGA GCGCTTTGTG GGGTGGCTGG AGCTCGTGCA GGACCACCAC
ACCCTCCACG GCTCCACCGG TACGGGGCGC ATCACCCGCG ACAACCCGCG CGAGAACTTC
CTCGGCGACC CGGAGGCGGG CCTCTACTGC CACCCCACCA TCGTGGCCGG GGTGACCGGG
GAGGACGAGC TCTACAGGAC CGAGACCTTC GGCCCCATCG TGGGGGTCGC GAAGTTCTCC
ACCTTCGAGG AGGCGGTGGA GCTCGCCAAC GGCCACGGCT ACGGGCTCTC GGCGGCGATC
TACACGGAGA GCGCGAGAGA GGCGCTGCGC TTCCGGGAGC GCGTCTCGGC GGGGATGCTC
AGCGTGAACA ACTCCACGAG CGGGGCCGAG GCGCACCTGC CCTTCGGGGG CAACGGCAAG
AGCGGCAACG GCAGCCGCCT CTCCGGCGTG TGGGTGCTGG AGCAGTTCAC CCGCTGGCAG
GCGATGAACT GGGACTTCTC GGGCCGCCTC CAGAAGGCCC AGATGGACAT CCCGGAGCTG
CCCTTCGACG AGGGCTTCCG GCTGGAGGGC TAG
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| Protein sequence | MRTAEETGKR ETPARTVASR IGGRPAEEAP GGRLTSANPA RLEEAVAEVL LGDASTFVEA
CRAAREAQGE WAAVPAPIRA QVVKRIGRLV EKNKEALARL VTREVGKPYA ESLGEVQEII
DTCDFFTGEG RRLYGHTVPS EMPDKQLFTF RVPVGVAAVI TAGNFPVAVP SWYLVPAILC
GNAVVWKPAE YAAAAGDALA QLFFHGGLPE GVLNVVQARG EATFEGLERA LGEGLVDKVG
FTGSTEVGSR IGELCGRHRQ SPCLELGGKN PLVVMPDANL DLAVEGALFS GFGTAGQRCT
SLGTAIVHES VYGEFLSRFD RAVREAPVGD PMREVLYGPM ISEKFYERFV GWLELVQDHH
TLHGSTGTGR ITRDNPRENF LGDPEAGLYC HPTIVAGVTG EDELYRTETF GPIVGVAKFS
TFEEAVELAN GHGYGLSAAI YTESAREALR FRERVSAGML SVNNSTSGAE AHLPFGGNGK
SGNGSRLSGV WVLEQFTRWQ AMNWDFSGRL QKAQMDIPEL PFDEGFRLEG
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