| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2910 |
|---|
| Symbol | |
|---|
| ID | 4117389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2913727 |
|---|
| End bp | 2915547 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638037680 |
|---|
| Product | peptidase S9, prolyl oligopeptidase active site region |
|---|
| Protein accession | YP_645632 |
|---|
| Protein GI | 108805695 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCG CGGCGGAAGG GTTTCTGGAG GAGCTGCTCT CCGTCCCGGG GCTCTCGCAC
CCGCTCGTCT CCCCGGACGG GGGGCGTGCG GCGTGGAGCT GGTCGCGGCT GGGCCCGGCG
GCGGACGTCT TCTTCGCCCC GCTGGACGGC TCGCGCCCGC CGGCGCGCCT GACGGAGACC
CCGGAGGACA CCTTCCCGGT CTCCTGGACG CCGGACGGGG AGGGGCTCGT GGTGCGGCAG
GACCGGGGGG GCGACGAGCG GGCGCGGCTG TTTCTGGTGC GCCTGCGGCG CCCGGGCGAG
ATGGAGCCGC TCACCGACCC GGAGCCGGAC TTCTACGTGC GCGGCGGCCA GCTGCACCCC
AACGGGCGCT GGCTGGTCTA CGGCGCCAAC GCGGACCCGG AGACCGGGGA GGAGATAGAG
CCGACGGTCG TCTACCGCCG CGACCTGCGG ACGGGGGAGC TGCGGGCGCT GGCGCGCCCG
CGGCGGGGCG GCCCCTGCCG CCCGGAGCTG AACAGGCAGG GCGACCTCGT GCTCTACCAG
CGCCACGACG AGCACCCGGC GGGGCAGCAG ATCTGGGTCG TGGACATCGA GGGCGCAGAG
GACCGGAAGG TGCTGGACTT CGGCCCCGCC TCCAAGGTGG AGGCGACCTG GCTTCCGGAC
GGGCGCAGGA TCCTCTTTGC CGCCGAGACG GAGAGGGGCC GGAGGCCGGG CGTCCTGGAG
CCCGGCGGGG AGGTGCGTTG GCTGGCCGGC GGGGAGCGCG ACGTGGAGCG GGCCTTCGCC
GCCCCCGACG GGACGGCGGT GCTGCTGGAG GCGGCGGGCG GCAGGACGCG CGCCCTCCTC
GTGGACCCAG ACTCGGGGGA GGAGGGACGG CTCGAGACGC CCCGGGGAAG CTTCGTGCCG
CTGGCCCGGA CGGGGGACGG CTGGGCCGGC GTCTACCGGG AGGCGCGGAG CCCGGCGGAC
CTGGTGGCGC TCGACCCGAG GAGAGGCGCG ATGCGCAGCC TCACCCGCCT CCCGGAGAGG
ACGCGGCTCC GGCCCGCACG CCTGGTCCCG GCGGAGGACT TCTGCTGGCG CTCGGTGGAC
GGGCTAGCGG TGCACGGCTG GCTCTACCGT GCCCCGGGCC GGGCGAAGGG CGCCGTCGTC
CTCGTACACG GGGGGCCCAC CAGCCGCAGC GAGGACCGCT TCGACCCCCA GATCCAATAC
CTCCTCCGGC GCGGCTTCAA CGTCCTGTGC CCCAACTACC GGGGCAGCAC CGGCTACGGC
CTCGAGTTCC AGGAGAAGAT CAAAGAAGAC GGCTGGGGCG GACGCGAGCA GGAGGACATC
CGCACCGGTA TAGAAGCCCT GCTCCGCGCC GGCCTCGCCG GACCGGGCCG GGTGGGCGTC
ACCGGCGCCT CCTACGGGGG CTACTCCGCC TGGTGCGCCA TAACCCGCTA CCCGCCCGAG
CTGGTCGCCG CCGCAGCCCC CATCTGCGGC ATGACCGACC TCGCCCTCGA TTACCGCACC
ACCCGCCCGG ACCTCAGGCC CTACAGCGAG GAGATGCTCG GCGGCCCCCC CGAGAAGGTG
CCCGAACGCT ACCGGGAGCG CTCCCCCATA AACTTCGTCG GCAACATCCG CGGGCGGCTG
CTCATCGTCC AGGGCCTGCG CGACCCCAAC GTCAGCCCCG AGAACCTGCG CGCCGTGCTC
CGCGAACTCG AGCGCCACCG CATCCCCTAC GAGCTGCTCG CCTTCGAGAA CGAGGGCCAC
GGCGTCCTCC GGCCCGAAAA CCAGCGCACC CTCTACCGCC GGCTCGCCGC CTTCTTCGAG
AGGGCCTTCG ACGGTGCTTG A
|
|---|
| Protein sequence | MSGAAEGFLE ELLSVPGLSH PLVSPDGGRA AWSWSRLGPA ADVFFAPLDG SRPPARLTET
PEDTFPVSWT PDGEGLVVRQ DRGGDERARL FLVRLRRPGE MEPLTDPEPD FYVRGGQLHP
NGRWLVYGAN ADPETGEEIE PTVVYRRDLR TGELRALARP RRGGPCRPEL NRQGDLVLYQ
RHDEHPAGQQ IWVVDIEGAE DRKVLDFGPA SKVEATWLPD GRRILFAAET ERGRRPGVLE
PGGEVRWLAG GERDVERAFA APDGTAVLLE AAGGRTRALL VDPDSGEEGR LETPRGSFVP
LARTGDGWAG VYREARSPAD LVALDPRRGA MRSLTRLPER TRLRPARLVP AEDFCWRSVD
GLAVHGWLYR APGRAKGAVV LVHGGPTSRS EDRFDPQIQY LLRRGFNVLC PNYRGSTGYG
LEFQEKIKED GWGGREQEDI RTGIEALLRA GLAGPGRVGV TGASYGGYSA WCAITRYPPE
LVAAAAPICG MTDLALDYRT TRPDLRPYSE EMLGGPPEKV PERYRERSPI NFVGNIRGRL
LIVQGLRDPN VSPENLRAVL RELERHRIPY ELLAFENEGH GVLRPENQRT LYRRLAAFFE
RAFDGA
|
|---|
| |